Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g2485 | ATGATGATTCAAATTCAACTAGCTAAACTCCTACACCAACCTCTAAAACTGAAACCAAAACAAAAACCCTTAACCCTCTTCTTCTCCACTTCTTCACCTCCACAACAAACTACAGTAGTAACCACCGCAGTTTCCATCCTCACAAACCACCGTTCCAAATCCCGGTGGAACACACTCCACACCCTCTACCCAACCACCATCCCCTCCACCGATTTCTCCCAAATCACACTCCACCTCAAAAACAAACCCCACCTTGCTCTTCACTTCTTCCAATGGACACAATCCAAATCCCTCTGTCACCACAATCTCTCTTCTTACTCCACCATCATTCACATCCTCGCACGTGCCCGTCTCTACTCACACGCTTACACCACCATCAAAACCGCCCTTATTGTTAAGGATGATTCATCTGCCACGCCTTTGAAGTTATTTGAGATCCTTGTTAATACTTATCGCGATTGTGGGTCTGCTCCGTTTGTTTTTGATTTGTTGATCGAAGCGTGTTTGGAATCAAGAAAAATTGAAGCTGCAATTGAGATTAGTAGAATGTTGCTATCTCGTGGAATTAGTCCTAAAGTTGCTACATTGAATAATTTGATTTCTAGGGTTTGTAGAAAATTTGGGGTGGATGTAGGGTATGAGATTTACCACGAGTTTTTTCGGTTAGACGATAAAAAGGATGAAATTTTGAAAATTTCGAAAAGGGGTTTTGGTTTTAGAGTTGTTAAACCTAATGTGCATAGTTTTAATACATTGATGGTTTGTTGTTATCAAAATGGGTTGGTTGAGAAAGTTGAGGAAATTTGGAATGAAATGAGTGAAATGGGTTGTGATCCTAATGCTTATAGCTATAGTTTATTGATGGCTGTGTTTTGTGATGGAGGGAGGTTGGAGGATGCTGAGAAGCTGTGGGAGGAAATGAGAAAGATGGAAGTTGAGCCTGATGTGGTTAGTTATAATACTATAATTTGTGGGTTTTGTAAGGTTGGTGATGTTGGAAGAGCTGAGGAATTTTTTAGAGAAATGGGATTGGTTGGTATTGATGCAACTGTTTCAACTTATGAGCATCTTGTTAAGGGGTATTGTGGTATTGAGGATGTTGATTCAGCTGTTCTTGTTTATAAGGATATGTTTAGGAAGGATTTTAGGCCTGATGCGTCGACGCTTGATATAGTGGTTAGGTTACTTTGTGATAAGGGTAGGGTTGAGGAAGGTTTGGAGTTTTTCAGGAGTGGAGTTGGTAAGTTTGGTTTAGTTCCAAAGGAGAAGAGTTATGAGGCCTTGATTAAGGGGTTTTGTTTTGAGGGGAGGATGGATGAGGCATTGAAACTTCAGGCAGAGATGGTAGGAAAAAGGTTTCAACCGAATTCGGAAATATATGAAGTTTTTATTGATGGGTATGTTAGACAAGGGAATGAGGAGATGGCAGAAGCTTTGAGGAAAGAAATGCTGGAAACTCAGATGCAGAGGTAA | 1473 | 0.4046 | MMIQIQLAKLLHQPLKLKPKQKPLTLFFSTSSPPQQTTVVTTAVSILTNHRSKSRWNTLHTLYPTTIPSTDFSQITLHLKNKPHLALHFFQWTQSKSLCHHNLSSYSTIIHILARARLYSHAYTTIKTALIVKDDSSATPLKLFEILVNTYRDCGSAPFVFDLLIEACLESRKIEAAIEISRMLLSRGISPKVATLNNLISRVCRKFGVDVGYEIYHEFFRLDDKKDEILKISKRGFGFRVVKPNVHSFNTLMVCCYQNGLVEKVEEIWNEMSEMGCDPNAYSYSLLMAVFCDGGRLEDAEKLWEEMRKMEVEPDVVSYNTIICGFCKVGDVGRAEEFFREMGLVGIDATVSTYEHLVKGYCGIEDVDSAVLVYKDMFRKDFRPDASTLDIVVRLLCDKGRVEEGLEFFRSGVGKFGLVPKEKSYEALIKGFCFEGRMDEALKLQAEMVGKRFQPNSEIYEVFIDGYVRQGNEEMAEALRKEMLETQMQR* | 491 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g2485 | 490 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 4 | 488 | - | - | |
| Mal7g2485 | 490 | Gene3D | Tetratricopeptide repeat domain | 309 | 405 | IPR011990 | GO:0005515 | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 385 | 420 | IPR002885 | - | |
| Mal7g2485 | 490 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 4 | 488 | - | - | |
| Mal7g2485 | 490 | Pfam | PPR repeat family | 244 | 292 | IPR002885 | - | |
| Mal7g2485 | 490 | Pfam | PPR repeat family | 423 | 468 | IPR002885 | - | |
| Mal7g2485 | 490 | Pfam | PPR repeat family | 350 | 397 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 421 | 455 | IPR002885 | - | |
| Mal7g2485 | 490 | Gene3D | Tetratricopeptide repeat domain | 223 | 308 | IPR011990 | GO:0005515 | |
| Mal7g2485 | 490 | Gene3D | Tetratricopeptide repeat domain | 412 | 490 | IPR011990 | GO:0005515 | |
| Mal7g2485 | 490 | Gene3D | Tetratricopeptide repeat domain | 74 | 222 | IPR011990 | GO:0005515 | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 456 | 490 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 157 | 191 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 280 | 314 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 315 | 349 | IPR002885 | - | |
| Mal7g2485 | 490 | Pfam | PPR repeat | 311 | 342 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 350 | 384 | IPR002885 | - | |
| Mal7g2485 | 490 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 245 | 279 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 248 | 281 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 459 | 485 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 424 | 456 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 282 | 316 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 317 | 342 | IPR002885 | - | |
| Mal7g2485 | 490 | TIGRFAM | PPR: pentatricopeptide repeat domain | 353 | 386 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal7g2485 | 160 | 484 | Glycosyltransferase | AT1G05670 | 26.879 | 2.96e-34 | 135 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g2485 | - | - | mtr:MTR_0026s0200 | 778.859 |