Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2469 ATGACAAACACAAAAGGTGGAACCATGTTAGTAGAGAGAAACACCAATAATAATAGCACCAATAAAATTCATAGACCAAAATTTGGAGCTTTTCTACACTCAGAACCCACGTTATTTCACACAACCAACAACGACGATGAACAAGGACGCATCAGCAACGCCTCCGCCGCGAGTCCTCGAACATATTTCGGCGACAGCAGCAGCACACCCACCAGCAGCAGCAACAATGCTTCTCCTTCTCCTAATTACATGTTATCTCCATGGAACCAAGCTTCCTCTCCTCTCAACAAATCTCCATGGTTAATGCCATCATCAGAAGCAATCAACCTCTTCCAACACCACCAAAGCCACCGCCATGACAACGATTATAACGACAGTTATTTCCCCGAAAATGGCCTCATCGGGTCACTGGTTCGTGAAGAAGGTCACATATACTCCTTAGCTGTTTCTGGTGATTTGTTATACACCGGTTCAGATAGCAAAAACATAAGGGTGTGGAAAGAACTTAAAGATTACACAGGTTTCAAATCAAGCAGTGGTTTGGTAAAAACCATTGTTATCTCCGAAGGAAACATCTTCACCGGTCATCAAGATGGAAAAATCAGAGTTTGGAAAATTTCTTCAAAAAATTCTAGAACTCATAAGCGTGTTGGAAGCTTACCAACTTTCAAAGACTATGTCAAAAGTTCAATGAATCCGAAGAACTACGTTGAAGTCCGGCGACGGAGAAACACGGTGAAGGTGAAGCATTTCGACGCAGTTTCTAGTTTGAGTTTGGATCAAGAAGAAGGGTTGTTGTATTCAGGTTCGTGGGATAAAACTCTCAAAGTATGGCGTGTGGCAGATTTCAAGTGTTTGGAATCGATTATAGCTCATGATGATGCTGTAAATGCGGTGGTTGCTGCATTTCAAAGCTATGTTTTCACCGGCTCCGCCGATGGAACGGTGAAGATGTGGAGGAGAGAAACAGAAGGAAAAGGGAAGAAAACGAAGCATGTTTTGGATAGGATATTGTTGAAGCAAGAAAACGCTGTGACGGCGTTGACGGTTAACCGTTCATCAACGATTATTTATTGCGGTTCTTCTGATGGATTGGTTAACTTCTGGGAGCGTCAGCAGAAGAATAATCTGACTCACGGCGGTGTTTTAAAGGGACACAAACTCGCCGTCCTTTGTCTCGCGGAGGCGGGGAACCTTGTTTTCAGTGGTTCCGCTGATAAGAATGTTTGTGTATGGAAGCGCGATGAAAGAGGGGCTCACATCTGTCTTTCTGTTTTGACGGGACACACTGGTCCCGTCAAATGCATTGCAGTTGAAGAACACGAGGAGGAGGAGGGTCATGATGGTGAGAACGATGATCAACGCTGGATAGTTTACACTGGTAGTTTGGATAAGTCTGTTAAGGTCTGGCGCGTATCTGAACACGCGCCAGAATTGAGATTGATGCAAAGTTGGAATTCTCCAATTGCATCGTATGGATATGAATCCCCAGGAACATTCAATGTCAGCAACAATAGTAATAGAAGGAAGTTGCAAAAATAA 1542 0.4371 MTNTKGGTMLVERNTNNNSTNKIHRPKFGAFLHSEPTLFHTTNNDDEQGRISNASAASPRTYFGDSSSTPTSSSNNASPSPNYMLSPWNQASSPLNKSPWLMPSSEAINLFQHHQSHRHDNDYNDSYFPENGLIGSLVREEGHIYSLAVSGDLLYTGSDSKNIRVWKELKDYTGFKSSSGLVKTIVISEGNIFTGHQDGKIRVWKISSKNSRTHKRVGSLPTFKDYVKSSMNPKNYVEVRRRRNTVKVKHFDAVSSLSLDQEEGLLYSGSWDKTLKVWRVADFKCLESIIAHDDAVNAVVAAFQSYVFTGSADGTVKMWRRETEGKGKKTKHVLDRILLKQENAVTALTVNRSSTIIYCGSSDGLVNFWERQQKNNLTHGGVLKGHKLAVLCLAEAGNLVFSGSADKNVCVWKRDERGAHICLSVLTGHTGPVKCIAVEEHEEEEGHDGENDDQRWIVYTGSLDKSVKVWRVSEHAPELRLMQSWNSPIASYGYESPGTFNVSNNSNRRKLQK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2469 513 PANTHER EN/SPM-LIKE TRANSPOSON PROTEIN-LIKE 15 486 - -
Mal7g2469 513 ProSiteProfiles Trp-Asp (WD) repeats profile. 247 288 IPR001680 GO:0005515
Mal7g2469 513 Gene3D - 333 513 IPR015943 GO:0005515
Mal7g2469 513 ProSiteProfiles Trp-Asp (WD) repeats profile. 289 319 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 130 167 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 168 205 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 282 320 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 241 279 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 419 471 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 376 413 IPR001680 GO:0005515
Mal7g2469 513 SMART WD40_4 331 370 IPR001680 GO:0005515
Mal7g2469 513 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 247 280 - -
Mal7g2469 513 CDD WD40 141 471 - -
Mal7g2469 513 PRINTS G protein beta WD-40 repeat signature 458 472 IPR020472 -
Mal7g2469 513 PRINTS G protein beta WD-40 repeat signature 266 280 IPR020472 -
Mal7g2469 513 PRINTS G protein beta WD-40 repeat signature 307 321 IPR020472 -
Mal7g2469 513 MobiDBLite consensus disorder prediction 1 23 - -
Mal7g2469 513 SUPERFAMILY WD40 repeat-like 134 482 IPR036322 GO:0005515
Mal7g2469 513 Gene3D - 230 332 IPR015943 GO:0005515
Mal7g2469 513 Gene3D - 129 229 IPR015943 GO:0005515
Mal7g2469 513 ProSiteProfiles Trp-Asp (WD) repeats profile. 338 379 IPR001680 GO:0005515
Mal7g2469 513 Pfam WD domain, G-beta repeat 141 167 IPR001680 GO:0005515
Mal7g2469 513 Pfam WD domain, G-beta repeat 381 413 IPR001680 GO:0005515
Mal7g2469 513 Pfam WD domain, G-beta repeat 284 319 IPR001680 GO:0005515
Mal7g2469 513 Pfam WD domain, G-beta repeat 422 470 IPR001680 GO:0005515
Mal7g2469 513 Pfam WD domain, G-beta repeat 250 278 IPR001680 GO:0005515
Mal7g2469 513 ProSiteProfiles Trp-Asp (WD) repeats profile. 383 413 IPR001680 GO:0005515
Mal7g2469 513 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 15 486 IPR045182 -
Mal7g2469 513 MobiDBLite consensus disorder prediction 38 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2469 Mal-Chr7 85499098 85500639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2469 186 492 Acyl Lipid Metabolism Gene Families AT3G18860 25.532 3.92e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2469 - - gmx:100790597 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2469 7 85499098 85500639 Mal7g2469 7 85499098 85500639 ECH