Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2436 ATGGGAATCACAACTCATCTTGTTAAGCTCTTACTTGTCCTTCTAACAATCACTTTTCATTCTTCCTTTGCTGAAGTTTTTTTCGAAGAGACATTCCAAGATGGGTGGAAGAGTCGTTGGGTTTTGTCTGATTGGAAAAGGTGTGAAGGAAAAGCAGGTACCTTTAAGTATACTGCTGGAAAATGGCCTGGTGATCCTGATGACAAAGGTATTCAGACATATAATGATGCCAAGCATTTTGCCATATCTGCAAAGATACCGGAGTTGACCAATAAGAACAGAACCCTGGTGCTTCAGTATTCTATTAAATTTGAACAGGATATTGAGTGTGGTGGCGGTTACATCAAACTTCTTTCTGGTTATGTCAATCAGAAGAAGTTTGGTGGTGATACTCCTTATAGTTTGATGTTTGGACCAGATCTGTGTGGCACACAGACAAAGAAGCTCCATGTTATATTGTCATACCAGGGGCAAAATTATCCTATTAGAAAGGATCTGGAGTGTGAAACAGACAAATTAACTCATTTCTATACATTTATTCTAAGGCCTGATGCCACCTATAGTGTCCTTGTCGATAATCGAGAAAGAGATTCTGGTAGCATGTACACCGATTGGGACATCCTTCCTCCAAGGAAAATCAAGGATGTCAAAGCAAAAAAGCCAGCGGACTGGGATGATAGAGAGTACATTGAGGACCCTAATGGTGTCAAGCCAGAGGGATATGATTCAATTCCAGCTGAAATTCCTGATCCAAAAGCCAAGAAGCCTGTTGACTGGGATGATGAAGATGATGGACTATGGAAGCCTTCCAAAATTCCTAATCCAGCATACAAAGGACCGTGGAAACGAAAGAAAATCAAGAACCCCAACTACAAGGGAAAGTGGAAGACTCCATGGATTGATAACCCAGAATTTGAGGACGATCCTGATCTTTATGTGCTGAAACCAATAAAGTATGTTGGCATTGAAGTGTGGCAGGTGAAGGCCGGTTCGATTTACGACAACATATTAATTTGTGATGACCCGCAGTATGCAAAACAAGTTGTAGAAGAATATATGGTTAATAATAGAGAGGCTGAAAAAGAAGCTTTTGAAGAAGCAGAAAAAGAAAGAAGGGCTCGGGAAGAAGAGGAGGCACAAAGGGCAAGAGAAGAGGGCGAAAAGAGGAGGAGAGACAGGGACCGTAAATATGGAGATAAGAGGCACCGTAGAAGGCCGGATCCACACGAATACATGGATGATTATGAACATGATGAACTTTGA 1263 0.4141 MGITTHLVKLLLVLLTITFHSSFAEVFFEETFQDGWKSRWVLSDWKRCEGKAGTFKYTAGKWPGDPDDKGIQTYNDAKHFAISAKIPELTNKNRTLVLQYSIKFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSLMFGPDLCGTQTKKLHVILSYQGQNYPIRKDLECETDKLTHFYTFILRPDATYSVLVDNRERDSGSMYTDWDILPPRKIKDVKAKKPADWDDREYIEDPNGVKPEGYDSIPAEIPDPKAKKPVDWDDEDDGLWKPSKIPNPAYKGPWKRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNILICDDPQYAKQVVEEYMVNNREAEKEAFEEAEKERRAREEEEAQRAREEGEKRRRDRDRKYGDKRHRRRPDPHEYMDDYEHDEL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2436 420 MobiDBLite consensus disorder prediction 248 268 - -
Mal7g2436 420 PRINTS Calreticulin signature 105 123 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 PRINTS Calreticulin signature 220 233 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 PRINTS Calreticulin signature 286 305 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 PRINTS Calreticulin signature 319 339 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 PRINTS Calreticulin signature 248 270 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 PRINTS Calreticulin signature 131 147 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 SUPERFAMILY P-domain of calnexin/calreticulin 206 321 IPR009033 GO:0005509|GO:0005515
Mal7g2436 420 Coils Coil 356 392 - -
Mal7g2436 420 MobiDBLite consensus disorder prediction 359 420 - -
Mal7g2436 420 PIRSF Calreticulin 4 420 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 ProSitePatterns Calreticulin family signature 2. 135 143 IPR018124 GO:0005509
Mal7g2436 420 Gene3D Calreticulin/calnexin, P domain 210 311 IPR009033 GO:0005509|GO:0005515
Mal7g2436 420 PANTHER CALRETICULIN AND CALNEXIN 6 420 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 Pfam Calreticulin family 28 263 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 Pfam Calreticulin family 265 338 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mal7g2436 420 ProSitePatterns Calreticulin family signature 1. 103 118 IPR018124 GO:0005509
Mal7g2436 420 PANTHER CALRETICULIN-3 6 420 - -
Mal7g2436 420 Gene3D - 25 381 - -
Mal7g2436 420 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 223 IPR013320 -
Mal7g2436 420 MobiDBLite consensus disorder prediction 359 394 - -
Mal7g2436 420 MobiDBLite consensus disorder prediction 225 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2436 Mal-Chr7 84880354 84892256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2436 6 346 Miscellaneous Gene Families AT5G61790 34.171 1.28e-62 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2436 K08057 - gmx:100802428 719.539