LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g2342	ATGGCATACCTTACCCACATACACTTTCCCACCCCCATCTCTTCTTACTACACCACCCCTAAAACCCCAGTCCCCATTTTCTCATTCCACAACACTCTCCCCTTTTCCACTTCAATTCTTCGCTCGGTTTCTCTCCCTAAATCCATCTCTCTCCCTCACCGTAGTCTCTCCCGCTCCGCCCCGCAGTTCAGCGCCGGTGAATTCTCCGGCACCACCGTCAACGATGACGATGAATTACCAGAAGAATTGGTTGAATTACCAGATGAATTAGAAAGTCAGATTGATGATTATTCCGATGATGATGATGTTGATGTTGTTGCGCTTGAGCGAGAAGCAAAGGAAGTTGCGTTGGAGTATTCAAGCTCTTTATCTCGCGTTTTGACTATCGAAGATGAGAGCAAGGAAACTGGTAAAAACTCTAAGAGGAGTAAACCGAAGAAAAAAATTATCCCGGACAATCTTCTCCCAAGGATTGCTATTGTTGGACGACCGAACGTTGGCAAGTCAGCATTATTTAATCGTCTCGTTGGGGGAAACAAGGCGATTGTGGTGGATGAACCTGGGGTTACGAGGGATCGTTTATATGGCCGATCATATTGGGGAGATCATGAATTCATGGTAGTGGACACTGGTGGTGTTCTCACTGTTTCAAAATCACAAAGTACTGTTATGGAAGAGCTGGATATTAGTACAACCATTGGTATGGATGGTATTCCCCTAGCCTCTAGAGAGGCAGCTGTTGCCAGGATGCCGTCAATGATTGAGAGACAAGCGATTGCAGCTGTGGAAGAATCACCTGTTATTATTTTCCTGGTTGACGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAAAAACTACTCAAATAAAAGTATCATTCTTGCAGTTAACAAGTGTGAATCTCCACGGAAAAGAATTATGCAGGTGTCTGAATTTTGGTCCCTTGGGTTAGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGTTACAGAAAGTTGAGGAGCCACAGAATCTTGTTGAAGAAGAAGATTATGTTCCAGCAATTTCAATTGTCGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGTACTACACGTGATGCTATTGATACCGAATTTACTGGACCAGATGGCCAGAAGTTCCATCTTATTGATACTGCTGGAATCAGGAAAAGGACAACTGTAGCCTCAGCTGGAAGTACAACAGAGGCTTTGTCAGTGAATCGGGCATTTCGTGCTATTCGGCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGCGTGATCGTTGTAAACAAGTGGGATACGATACCAAATAAAAATCATGAGACTGCATTATTCTATGAGCAAGATGTCAGAGAGAAGCTTCGCTTACTTGACTGGGCTCCAGTTGTTTATTCTACTGCTCTCGCTGGCCAAAGTGTTGACAAGATCATTTTTGCTGCTAGTGAAGTCGAAAAGGAGAGATCAAGAAGACTTGGTACTTCTATATTGAATCAAGTAGTGAGGGAAGCAGTAACTTTTAAGCCTCCTCCCAGGACACGAGGTGGAAAAAGAGGGCGTGTTTATTATTGCACTCAGGCTGCTATAAGGCCGCCTACATTTGTATTCTTTGTCAATGATGCAAAACTTTTTCCTGAAACTTACCGGCGCTTTATGGAGAAGCAGCTGCGTTCAAATGCGGGATTTCCTGGTACCCCCATTCGACTTCTGTGGCGCAGCAGAAGAAAAATGGAAAAAGATGACGGAAAAAAGGTGACAAGGCCTAAAGACAATTTTGTGTCACACCGTCGAAAATTGATATCAGCTACGCAGTAG	1980	0.4419	MAYLTHIHFPTPISSYYTTPKTPVPIFSFHNTLPFSTSILRSVSLPKSISLPHRSLSRSAPQFSAGEFSGTTVNDDDELPEELVELPDELESQIDDYSDDDDVDVVALEREAKEVALEYSSSLSRVLTIEDESKETGKNSKRSKPKKKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDHEFMVVDTGGVLTVSKSQSTVMEELDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIADWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGELLDLVCSGLQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNHETALFYEQDVREKLRLLDWAPVVYSTALAGQSVDKIIFAASEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDDGKKVTRPKDNFVSHRRKLISATQ*	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g2342	659	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	156	349	IPR027417	-
	Mal7g2342	659	CDD	EngA2	366	539	-	-
	Mal7g2342	659	Pfam	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	546	627	IPR032859	-
	Mal7g2342	659	Gene3D	-	361	544	IPR027417	-
	Mal7g2342	659	Gene3D	-	153	360	IPR027417	-
	Mal7g2342	659	PANTHER	GTPASE DER	137	636	-	-
	Mal7g2342	659	Pfam	50S ribosome-binding GTPase	157	304	IPR006073	GO:0005525
	Mal7g2342	659	Pfam	50S ribosome-binding GTPase	366	487	IPR006073	GO:0005525
	Mal7g2342	659	ProSiteProfiles	EngA-type guanine nucleotide-binding (G) domain profile.	364	544	IPR031166	GO:0005525
	Mal7g2342	659	Gene3D	-	546	630	IPR015946	-
	Mal7g2342	659	CDD	EngA1	159	347	-	-
	Mal7g2342	659	PRINTS	GTP1/OBG GTP-binding protein family signature	366	386	IPR006073	GO:0005525
	Mal7g2342	659	PRINTS	GTP1/OBG GTP-binding protein family signature	440	458	IPR006073	GO:0005525
	Mal7g2342	659	PANTHER	GTP-BINDING PROTEIN	137	636	-	-
	Mal7g2342	659	TIGRFAM	GTPase_EngA: ribosome-associated GTPase EngA	249	626	IPR016484	GO:0005525
	Mal7g2342	659	ProSiteProfiles	EngA-type guanine nucleotide-binding (G) domain profile.	156	351	IPR031166	GO:0005525
	Mal7g2342	659	Hamap	GTPase Der [der].	155	630	IPR016484	GO:0005525
	Mal7g2342	659	TIGRFAM	small_GTP: small GTP-binding protein domain	364	532	IPR005225	GO:0005525
	Mal7g2342	659	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	324	633	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g2342	Mal-Chr7	81722110	81727948	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g2342	-		-	gmx:100777588	966.837

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g2342	7	81722110	81727948	Mal7g2342	7	81722110	81727948	ECH