Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2309 ATGCATGCTCTTGTAAGAATTACAACATCCTCTAGAATTCCCACAAAAAATGTCATCCTCGACTACCGTTTTCTCCGATCAGAACCCGAATCCTACGCTAAACTCATCGAAACATACACTCATGATCGAGCATTACACCTAGGAAAGAAGCTTCATGCACACTTAACTACCAACGGCTATGCGAGTTTCAATCTCATCTTATCCAATCTCATAGCCTTATACACAACCTGTGGCCAACTCAACCTTGCACGTAAACTGTTCGACAAAATTCCCCAAACAAATGTTCGCCGTTGGATCTCCCTTATCGGTACATGCGCTCGCTCTGGCTTCCACGATCACGCTCTTGCCGTTTTCTCCGAGATGCAAACTCTCAATGGCCAAAAGTCCAACAGCGTATTCGTCATTCCTAGTGTTCTCAAAGCTTGTGGCCATGTTGGTGATAGAATCTATGGAGAGCAAGTGCATTGTTTGGTTTTGAAGTGTTCGTTTGAGATTGATGCTTTTGTTTCAAGTGGGTTGATTGTTATGTATTCTAAGTGTGGTGAAATTGGAGATGCACGTAAGGTGTTTGATGGAATGGCTGTGAAGGATTTGGTGGCGATGAATGCTGTTGTTTCTGGGTACGCTCAACAAGGGCTACCAAATGAGGCGTTGAGTTTGGTGGAAAACATGAAGTTGATGGGTTTGAACCCAAATGTAGTTACTTGGAATGCTTTGATATCTGGGTTTGCGCAGAAATGTGACCGAGAAATGGTATCTCAGATTTTTAGGTTGATGATTGGAGACGGTGTTGAGCCTGATGTGGTGTCATGGACCTCTGTTTTATCTGGTTTTGTGCAGAATTTTCGTAATGAGGAAGCTTTTGATACGTTTAAGCAAATGTTGCGTCGTGGGTTCTGTCCAACTTCGGCTACTATCAGCGCGCTTCTGCCAGCTTGTGCTACTGCGGCGAGAGTGAGGTCTGGTAAGGAGATTCATGGCTACGCTTTGGTGATTGGTGTGGAGGATGATCTATATGTAAGGAGTGCTTTGGTTGACATGTATGCAAAATGCGGGTTAATTTCTGAAGCTAGGACACTGTTTTGTAAGATGCCGGAGAAGAACACTGTGACGATGAACTCTATGATTTTCGGTTATGCGAATCATGGATATTGTGAAGAAGCTATTGAGCTCTTCAATCGGATGGAGATGGAAGGGGTACCCAAGCTAGATCATTTAACTTTCACGGCAGCTCTCACAGCATGTAGTCATGTTGGAGATATTGAACTTGGGCAGAGGCTGTTCAAGATTATGCAAGAGAAATACCGCATTGAGCCACGATTGGAGCATTATGCATGCCTGGTGGATCTTTTTGGTCGAGCAGGAAAACTCGAGGAAGCGTATGACATAATCAAGACTATGCCGCTTGAACCTGATTTGTTTGTGTGGGGTGCATTATTGGCTGCTTGTAGAAATCATGGGCATGTGGAGCTTGCAGAAGTAGCTGCTATGCATTTGTCGAAGTTGGAACCCGAGAGTGCTGGGAATCGTCTTCTGCTGTCCAGCTTGTATGCGGATGCTGGAACATGGGGAAAGGTTGAGCGGATCAAGAGAAGGATAAAGAAAGGAAAACTCAGAAAACTTCAAGGGTTGAGTTGGATAGATGATGTACAATAA 1656 0.4432 MHALVRITTSSRIPTKNVILDYRFLRSEPESYAKLIETYTHDRALHLGKKLHAHLTTNGYASFNLILSNLIALYTTCGQLNLARKLFDKIPQTNVRRWISLIGTCARSGFHDHALAVFSEMQTLNGQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSGLIVMYSKCGEIGDARKVFDGMAVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGLNPNVVTWNALISGFAQKCDREMVSQIFRLMIGDGVEPDVVSWTSVLSGFVQNFRNEEAFDTFKQMLRRGFCPTSATISALLPACATAARVRSGKEIHGYALVIGVEDDLYVRSALVDMYAKCGLISEARTLFCKMPEKNTVTMNSMIFGYANHGYCEEAIELFNRMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYRIEPRLEHYACLVDLFGRAGKLEEAYDIIKTMPLEPDLFVWGALLAACRNHGHVELAEVAAMHLSKLEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWIDDVQ* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2309 551 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 26 194 - -
Mal7g2309 551 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 244 548 - -
Mal7g2309 551 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 196 243 - -
Mal7g2309 551 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 232 266 IPR002885 -
Mal7g2309 551 Pfam PPR repeat family 266 314 IPR002885 -
Mal7g2309 551 Pfam PPR repeat family 367 416 IPR002885 -
Mal7g2309 551 Pfam PPR repeat family 196 244 IPR002885 -
Mal7g2309 551 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 267 301 IPR002885 -
Mal7g2309 551 Pfam E motif 486 548 IPR046848 -
Mal7g2309 551 Pfam PPR repeat 98 123 IPR002885 -
Mal7g2309 551 Pfam PPR repeat 173 194 IPR002885 -
Mal7g2309 551 Pfam PPR repeat 444 467 IPR002885 -
Mal7g2309 551 Gene3D Tetratricopeptide repeat domain 216 323 IPR011990 GO:0005515
Mal7g2309 551 Gene3D Tetratricopeptide repeat domain 21 148 IPR011990 GO:0005515
Mal7g2309 551 Gene3D Tetratricopeptide repeat domain 400 550 IPR011990 GO:0005515
Mal7g2309 551 PANTHER OS03G0271300 PROTEIN 26 194 - -
Mal7g2309 551 PANTHER OS03G0271300 PROTEIN 244 548 - -
Mal7g2309 551 PANTHER OS03G0271300 PROTEIN 196 243 - -
Mal7g2309 551 TIGRFAM PPR: pentatricopeptide repeat domain 269 302 IPR002885 -
Mal7g2309 551 TIGRFAM PPR: pentatricopeptide repeat domain 234 268 IPR002885 -
Mal7g2309 551 TIGRFAM PPR: pentatricopeptide repeat domain 201 233 IPR002885 -
Mal7g2309 551 TIGRFAM PPR: pentatricopeptide repeat domain 370 400 IPR002885 -
Mal7g2309 551 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Mal7g2309 551 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 197 231 IPR002885 -
Mal7g2309 551 Gene3D Tetratricopeptide repeat domain 324 399 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2309 Mal-Chr7 81210625 81212280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2309 83 548 Glycoside Hydrolase AT3G49170 32.869 1.85e-85 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2309 - - gmx:100790576 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2309 7 81210625 81212280 Mal7g2309 7 81210625 81212280 ECH