Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2270 ATGGGTCAAGGTGGTCTTAGTTGCAGAGGGAGTCATGAACATGGACTCTTTCGTGCTGTGCAACATGGTGACCTTCAAACTGTTGCATCTTTGTTGCAGACTCACCCTTCTCTTCTTCATCGTACTACTGTTTATGATCACCATTCCCCTCTTCATATTGCTGCTGCCAATGGTCAGATCCAGGTTTTATCTAGGCTTTTAGATGGATCTGCAAATCCAGATGTGTTGAATCGACAAAAGCAGACCCCACTTATGTTGGCAGCAATGCATGGAAAGATTGATTGTGTGGAAAAGCTGCTTGAAGCTGGTGCTAATGTGTTAATGTTTGATGTGTGTCATGGAAGAACCTGCTTGCATTATGCTGCTTACTATGGTCATTCTTCTTGCCTTAAGGCAATACTTTCTGCTGCTCAATCTAGTCCTGTGGCTGCTTCTTGGGGGTTTGCGCGGTTTGTGAATATTAGAGACGGTAGGGGTGCTACACCGTTGCATTTGGCAGCTCGTCAAAGACGGCCTGAATGCGTGCACATTTTGTTGTGTAGTGGAGCTCTTGTTTGTGCTTCGACTAGCAGATATGGATGTCCTGGAAGCACTCCTCTTCATCTAGCAGCAAAAGGAGGATCTCTCGATTGCATCCGTGAATTATTGGCATGGGGTGCAGATCGTCTTCAACGTGACACATCTGGGCGGATACCGTATGTGGTTGCTTTGAAGTACAAACATGGAGCATGTGCAGCATTGCTAAATCTTTCATCTGCACAGCCTCTTGTATGGCCATCATCATTGAAGATAATCAGTGAGCTTAATCCAGAGGCTAAAGTTTTATTAGAGCAGGCCTTGTTGGATGCGAACAGGGAAAGGGAGAAAAACATATTGAAAGGCAGTCCTTACTCTCTGCCATCTCCATCACACTCTGATCGAATGGATGACAATATCTCTGAGGTTAGCGAGATGGAATTATGCTGCATCTGCTTTGAGCAGGTGTGTACAATTGAAGTCCAGGACTGTGGCCACCAGATGTGTGCACAATGCACACTAACACTCTGTTGTCACAACAAGCCCAACACTTCAACTTCTCATCCCACCCCACCCGTTTGTCCATTCTGTCGAAGCACCATATCTAAACTGATGGTTATCAAGGTAGAAACTCACGAAGACATTGATCTAGACGGCGTTGATACCACTTGTTTCAAGCCAAGCAAGTCAAGGAAATTTCGTAACATGAACGAGGGTAGCAGCAGCAGTTTCAAGGGATTGTCCAATGTAAATTCATTCGGAAAAATGAGCGGCCGTAGTTCCGGGATGATTGCTTCCGAAAATGAATGGGTTGATGATAAGCCACAATGA 1347 0.4529 MGQGGLSCRGSHEHGLFRAVQHGDLQTVASLLQTHPSLLHRTTVYDHHSPLHIAAANGQIQVLSRLLDGSANPDVLNRQKQTPLMLAAMHGKIDCVEKLLEAGANVLMFDVCHGRTCLHYAAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGRGATPLHLAARQRRPECVHILLCSGALVCASTSRYGCPGSTPLHLAAKGGSLDCIRELLAWGADRLQRDTSGRIPYVVALKYKHGACAALLNLSSAQPLVWPSSLKIISELNPEAKVLLEQALLDANREREKNILKGSPYSLPSPSHSDRMDDNISEVSEMELCCICFEQVCTIEVQDCGHQMCAQCTLTLCCHNKPNTSTSHPTPPVCPFCRSTISKLMVIKVETHEDIDLDGVDTTCFKPSKSRKFRNMNEGSSSSFKGLSNVNSFGKMSGRSSGMIASENEWVDDKPQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2270 448 SMART ANK_2a 11 40 IPR002110 GO:0005515
Mal7g2270 448 SMART ANK_2a 113 143 IPR002110 GO:0005515
Mal7g2270 448 SMART ANK_2a 158 187 IPR002110 GO:0005515
Mal7g2270 448 SMART ANK_2a 79 108 IPR002110 GO:0005515
Mal7g2270 448 SMART ANK_2a 46 75 IPR002110 GO:0005515
Mal7g2270 448 SMART ANK_2a 195 224 IPR002110 GO:0005515
Mal7g2270 448 ProSiteProfiles Zinc finger RING-type profile. 321 370 IPR001841 -
Mal7g2270 448 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 389 IPR013083 -
Mal7g2270 448 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Mal7g2270 448 SUPERFAMILY RING/U-box 320 376 - -
Mal7g2270 448 MobiDBLite consensus disorder prediction 428 448 - -
Mal7g2270 448 Gene3D - 10 145 IPR036770 -
Mal7g2270 448 Gene3D - 146 198 IPR036770 -
Mal7g2270 448 ProSiteProfiles Ankyrin repeat profile. 158 190 IPR002110 GO:0005515
Mal7g2270 448 ProSiteProfiles Ankyrin repeat profile. 46 78 IPR002110 GO:0005515
Mal7g2270 448 ProSiteProfiles Ankyrin repeat region circular profile. 79 106 - -
Mal7g2270 448 PANTHER HOMEOBOX PROTEIN WARIAI 1 445 - -
Mal7g2270 448 Pfam Ankyrin repeats (3 copies) 113 183 IPR002110 GO:0005515
Mal7g2270 448 Pfam Ankyrin repeats (3 copies) 16 110 IPR002110 GO:0005515
Mal7g2270 448 Gene3D - 199 253 IPR036770 -
Mal7g2270 448 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED 1 445 - -
Mal7g2270 448 ProSiteProfiles Ankyrin repeat region circular profile. 158 183 - -
Mal7g2270 448 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Mal7g2270 448 SUPERFAMILY Ankyrin repeat 16 248 IPR036770 -
Mal7g2270 448 Pfam Ankyrin repeats (many copies) 196 233 IPR002110 GO:0005515
Mal7g2270 448 ProSiteProfiles Ankyrin repeat region circular profile. 46 78 - -
Mal7g2270 448 ProSiteProfiles Ankyrin repeat region circular profile. 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2270 Mal-Chr7 80446502 80449819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2270 33 238 Miscellaneous Gene Families AT5G02620 28.037 4.23e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2270 - - gmx:100800611 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2270 7 80446502 80449819 Mal7g2270 7 80446502 80449819 ECH
Mal4g0565 4 5586390 5588926 Mal7g2270 7 80446502 80449819 PCT