Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g2206 | ATGTATCGCAGAACCAAATCGATTAATCAAAGCATATTCTTCCTTAATTATTATCATTACCATGCTAATAACAATGCAAAAACCTTATTCCACACACATTCACAACAACCTCAAAACCAAAAACCAATCTCAAACCATCACAAACACAATCACATTCCATTCATAACCGAAATCAAACAAATCGAAACATCCGAAGAAGCTTTGTCTCTGTTTCATCGTTACAACGAACTCGGTTTCAAACACTATTACCCTTCTTACGCCGCATTACTCTACAAACTCGCCCGTTCTAAAAACTTCCACGCTGTAGAAACCATCCTCACACACATGAAAAACACCGATATTCAATGCAATGAAACGCTTTTCATCGCGCTTTTTCAACACTATGGTCCTTTAAAAGCCATTGAACTCTTTCGGGCAATGCCGAAATTCAACTGTGTTCGTACATTGCAGTCTTTTAATTCACTTCTTAATCTTCTCGTTGATAATGGCATGTTTTGTGAGGCTAATGAGGCTTTTGGGAGGTGCTATGAAATGGGTTTTCGTCCGAATCCGGTTACGTTTAATATTATGATAAAGGGTTGGTTGAAAAAAGGTGAATGGGAGAATGCTTGTAAGGTGTTTGATGAAATGCTTGAGAAGAAAGTGCAACCTAGTGTTGTTACTTATAATAGTTTGATTGGGTTTTTGTCTAGAAAAGGTGATTTGGATAAAGCGATGAGGTTGGTTGATGATATGAGACGGAAAGGGAAACGCGTGAATGGTGTAACGTACGCGCTTTTGATGGAGGGTTTGTGTTGTTTGGGAAAGTATGAGGAAGCTAAGAAGTTGATGTTTGATATGGCGTATCGTGGATGTAAACCTCAGCTTGTGAATTTTTCTGTTTTGATGAATGATCTTGGGAAGAGAGGGAAGATTGATGAGGCGATGGTTTTGTTTCGGGAGATGAGAAAGAGGCGGCTTAAACCGGATGTTGTGACATATAATGTGTTTGTAAATTATCTTTGCAAGGAAGGGAAGACGGAGGAAGCTTATAAAATGTTAGTTGAGATGCAGATTGGCGGTTGTGAGCCGAATGCTGCTACGTATAGGATGATGCTTGATGGTTTTTGTCAGAATGGGGATTTTGAGGGAGGGTTGAATGTTTTGAACGCCATGTTGGCGAGTAGACATTGCCCGCGATCCGATACGTTTAATTGTTTGGTTGTTGGGCTGTTGAAGTCTGGGAATATTTATGGTGGATGCTTTGTTTTGGAAAAAATGGTAAAGAGAAAGGTAGATTTTGATTTGGAGAGCTGGGAAGCTGTGATAAAGTATGCTTGCAGTGAGGATGATAAGGGTGGCAGTAACCTTTTGACTACACTTGTAGGATGA | 1371 | 0.3975 | MYRRTKSINQSIFFLNYYHYHANNNAKTLFHTHSQQPQNQKPISNHHKHNHIPFITEIKQIETSEEALSLFHRYNELGFKHYYPSYAALLYKLARSKNFHAVETILTHMKNTDIQCNETLFIALFQHYGPLKAIELFRAMPKFNCVRTLQSFNSLLNLLVDNGMFCEANEAFGRCYEMGFRPNPVTFNIMIKGWLKKGEWENACKVFDEMLEKKVQPSVVTYNSLIGFLSRKGDLDKAMRLVDDMRRKGKRVNGVTYALLMEGLCCLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTEEAYKMLVEMQIGGCEPNAATYRMMLDGFCQNGDFEGGLNVLNAMLASRHCPRSDTFNCLVVGLLKSGNIYGGCFVLEKMVKRKVDFDLESWEAVIKYACSEDDKGGSNLLTTLVG* | 457 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g2206 | 456 | Pfam | Pentatricopeptide repeat domain | 240 | 302 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 148 | 182 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 323 | 357 | IPR002885 | - | |
| Mal7g2206 | 456 | Gene3D | Tetratricopeptide repeat domain | 213 | 280 | IPR011990 | GO:0005515 | |
| Mal7g2206 | 456 | Gene3D | Tetratricopeptide repeat domain | 21 | 212 | IPR011990 | GO:0005515 | |
| Mal7g2206 | 456 | Gene3D | Tetratricopeptide repeat domain | 281 | 350 | IPR011990 | GO:0005515 | |
| Mal7g2206 | 456 | Gene3D | Tetratricopeptide repeat domain | 351 | 450 | IPR011990 | GO:0005515 | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 288 | 322 | IPR002885 | - | |
| Mal7g2206 | 456 | SUPERFAMILY | TPR-like | 72 | 345 | IPR011990 | GO:0005515 | |
| Mal7g2206 | 456 | PANTHER | OS05G0548600 PROTEIN | 18 | 453 | - | - | |
| Mal7g2206 | 456 | Pfam | PPR repeat | 396 | 424 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 253 | 287 | IPR002885 | - | |
| Mal7g2206 | 456 | Pfam | PPR repeat family | 322 | 371 | IPR002885 | - | |
| Mal7g2206 | 456 | Pfam | PPR repeat family | 182 | 226 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 218 | 252 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 183 | 217 | IPR002885 | - | |
| Mal7g2206 | 456 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 358 | 392 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 325 | 359 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 255 | 287 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 220 | 251 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 292 | 324 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 185 | 218 | IPR002885 | - | |
| Mal7g2206 | 456 | TIGRFAM | PPR: pentatricopeptide repeat domain | 361 | 392 | IPR002885 | - | |
| Mal7g2206 | 456 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 18 | 453 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal7g2206 | Mal-Chr7 | 78418183 | 78419553 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal7g2206 | 187 | 448 | Miscellaneous Gene Families | AT4G11690 | 23.333 | 4.47e-22 | 97.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g2206 | - | - | gmx:100776556 | 642.499 |