Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2178 ATGAATACGCCGAACAGCGACGGCGTAATCTTCACGAAGGAACCTTACATCGAAGTTGCAGCACCACGCAAAATTGCGGGAATTTCATTTTCGACGCTATCTGAAAAAGAAATCACCAAAATTGGCGAAGCTCAAGTGTGGACAGGTTCTTACTATGATCCATTTCGAAAGGCTGTTGATGGCGGCTTGCTGGATTCCCGTCTGGGCCCTGCTAATAAGAGTAGTCCTCCCTGTGCAACATGCCACGGGAATTTTGCTGACTGTAAAGGGCACTACGGATACTTACCGCTTGTCCAGCCTGTTTTCAATGTCGGATACTTAAATACAATTGTGAAAATATTGAAGTGCATTTGTAAGAGATGTGCTCGTATTCTCCTTGATGAAGATAGCTGTAAAACATTTTTGGTGAAAATGAGAAACCCCAAAATGGATGGGCTGCAGAAGATGAATACGCTTGAATCTGTAATGAAAAAATTTAAATCTGCTAAACAAATAGAGTGCCCGAGATGTGGATATATCAATGGTTCAGTAAAGCACCATAAGCCTACCCTGAGCATTGTTCATGACTGCTCAAAGGCTAACAATGATGATGTTGCAGAGCTCCAATCAGCTCTTCCTCATATAGACAATTATAGGGCATGCAACGACATAACTTCTCGAACTCTTAACCCTGTCGTAGTTCTTGACTTGTTTAAAAGGATGCATGGCGAGGACTGTCAATTACTTTATATTGCTCAAAAACCAGAGAATCTCATCATAACAAACATTGCTGTGCCACCTATAGTTATTCGCCCTTCAGTCATGATGGATGGACGGAGTAATGAAAATGACATAACAGAGAAGCTAAAGAAAATAATCCAGGCAAATGCTATCTTGCAACAAGAATCTGTAGAGTCGCAAAAATATCAGGATGGTTATCTTATGCTTCAATTCGAGGTTGCTCAATACATAAATAGTGATGTTAAAGGTGGACCATACAACCAGCAAATGAGCAAGCCTTTAACGGGTTTTATTCAGCGCATTAAAGGGAAGCAAGGTCGTTTCCGTAGCAATCTGTCTGGAAAACGTGTTGAATATACTGGCAGGACAGTTATTTCACCCGATCCTAATCTAAAGATTACTGAGGTTGCAATACCCATCCTCATGGCTCGCATTTTGACTTATCCTGAGCGTGTTACACATCACAACATAGAGAAGTTGAGACAATGTGTGAGAAATGGTCCGGATAAGTATCCTGGTGCAAGGTTGCTTAAAGATGCTGGAGGTACCTCATGGAATTTAAAAGTTTCTAGTAGGACGCGCCGCGCTGATGAACTGAAATTTGGTGATATTGTTCATCGCCATTTAGAAGATGGTGACATTGTTCTTTTCAACAGGCAACCAAGCTTGCATCGGATGTCTATGATGTGTCATAGGGCAAGGGTTATGCCTTGGAGAACTTTGAGATTTAATGAATCCGTATGTAATCCATATAATGCTGATTTTGATGGTGATGAGATGAACATGCATGTTCCACAGACTGAGGAGGCTCGAACAGAGGCTCTTTTGTTGATGACGGTGCAAAACAATTTGTGCACACCAAAAAACGGGGAAATTCTAGTTGCCTCTACACAAGACTTCTTAACTTCTTCCTTTCTCATAACTAGGAAAGATACTTTTTATGATCGTTCAACATTTTCACTTATTTGCACATACATGGGGGATGGCATGGATCCTATTGATTTGCCAACACCTGCAATTATTAAGCCGGTTGAACTCTGGAGTGGTAAACAGTTGTTTAGCATTTTATTGCGCCCACATGCAAATGTGAGGGTCTATGTGAACCTCACTGTAAAGGAGAAAACATACGGCTCAAAGCTTGATGACAGGGGAAGAGAATTGAAAACAATGTCTCCGGATGATGGATTTGTTTATTTTCGCAATAGTGAGTTAATCTCCGGACAACTTGGAAAGGTGACTTTAGGAAATGGCAACAAGGATGGACTTTTCTCTGTGCTACTAAGAGACTATAAATCAGATTCTGCTGCTGCTTGCATGAATCGTCTTGCTAAATTAAGTGCTCGGTGGATAGGTAATCATGGGTTCTCGATAGGCATTGATGACGTCCAACCTAAAGATAATCTGATCAAAGGGAAAGAAAAAACGATTGAGGATGGTTACAAGAAGTGTGATGGTTATATAGAAGCTTTCAATAAAGGAGACCTAAAACTCGCACCTGGTTGTGATGCTGCTCAGACATTAGAGTCTCAGATATTTAGTACATTAAATGGCTTACGTGATGCAACAGGGAAGGTTTGTATGAAAACATTACACTGGAGAAATAGTCCATTGATCATGTCGCAATGTGGCTCCAAAGGATCTGCCATCAATATCTGTCAAATGGTTGCCTGTGTTGGTCAACAGTCAGTTGGAGGTTGTCGTGCTACTAATGGGTTCATAGATCGTAATCTTCCTCATTTCCCTAAAAAAGCGAACACCCCTGATGCTAAAGGATTTGTTAAAGATTCCTTTTTCACTGGATTGTCAGCTACTGAGTTTTTCTTCCATACAATGGGAGGGAGAGAAGGGCTCGTTGATACAGCGGTCAAAACTGCAGATACTGGATATATGTCTCGTAGATTAATGAAAGCTCTAGAGGACTTATTTTTACATTATGATTACACTGTACGAGATACCAATGGTAGTATTGTTCAGTTTTGCTATGGTGATGATGGCATGGATCCAGCAGGCATGGAAGGAAAAGATGGAAAACCATTAAATTTTGATCGGTTATTTCTCAGAAGCAAGGCCATATGTCCCGGTGATGGAGATGATGTAATCTTATCTTCTTCAGATGTGCGTAAAGTACTTCACGAGAAGCTTTCAGAAGTTGGTATGTCCAAGTTAGTGGAGAAGAATGCTTCAGACAATGATATAATGTCAGAGATGGGCTTCTCTGCAGACTTTCTAAAATCTCTACAATCTTTTGTCGAAGAAAATACAAAATTAACAGAAACTATCGCCGAGGACGATTCTAATAATTTGAAGCACCTGAATAACTTTATTCCGAGAATATCTGGGATCAGTCGCAGACAGCTAGAGGTTTTTCTAGATATTTGTCTATCACGTTATCGCTTAAAAAAAATTGAGGCTGGAACTCCAATTGGTGCAATTGGAGCTCATAGTATTGGAGAACCTGGGACTCAGATGACTCTGAAAACTTTTCACTTTGCTGGGGTTGCAAGCATGAATGTTACTCTTGGAGTTCCTCGCATCATAGAAATAATAAATGGAGCAAACAATATTAAGACACCGATCATAACTGCAATACTTGAGAAAGATGATAGTGCAGATGTTGCAAGGATAGTGAAAGGTCGCATAGAAAAAACAAATTTAGGCCAGGTTGCGAAGAGTATTAAAGTTGTTTACTCTTCAAGATTAGCGGCTGTTTCTGTCTCGTTGGACATGGATATAATCCAAAAGGCAGATCTGAAGATAGATGCTAATACTGTAAAAGAATCAATTTTACAAACTGGAAAACTGAAGTTGAAGCCAGAGAATATTAAGATTTTGGATATTAAAAAGCTTCAAGTGATTGCCCAAGGTGCTAGCCGAAGTGAAATCCTTTTTCAACTTAATAATCTCAAAAATTTGCTTCCATCAGTTGTAGTGAAAGGAGTTAAAACTGTGGAACGTATTGTCCTAGAAATAAAAAATAAAAAAGATAAAGATAAAGTATCTGAGACGTACACATTACTGGCGGAAGGCAAGGGCCTTAAAGAGGTTATGGGAATTGAAGGGGTTAATGGACATAAAACTGTTAGTAATCATATCATTGAAATGATGAACATTCTGGGAATTGAGGCTGCCAGATATGGTATCATTGATCAGATACAGTTTACAATGAAATCGCATGGAATGAGTATAGACGTACGCCATATTATGCTTCTAGCAGATATGATGACTGTCAGGGGTCAAGTCCTCGGAATGACAAGATTTGGAATTCAAAAGATGGGCAGAAGTGCATTGATGCTCGCATCATTTGAGAGTTCAACGGACCATCTTTTCGAGGCATCCTTGCGTGGGAGGGATGACCCAATTGAAGGAGTGAGTGATTGCATAATCATGGGTAAACCAATTCAGATAGGCACTGGAATGATCGAGGTCAAACAAAGGTTGGATCCTCCAGTGTTGCATCAAGGAGCCGTTCCAATTCTATCTCGAGTTTGA 4209 0.401 MNTPNSDGVIFTKEPYIEVAAPRKIAGISFSTLSEKEITKIGEAQVWTGSYYDPFRKAVDGGLLDSRLGPANKSSPPCATCHGNFADCKGHYGYLPLVQPVFNVGYLNTIVKILKCICKRCARILLDEDSCKTFLVKMRNPKMDGLQKMNTLESVMKKFKSAKQIECPRCGYINGSVKHHKPTLSIVHDCSKANNDDVAELQSALPHIDNYRACNDITSRTLNPVVVLDLFKRMHGEDCQLLYIAQKPENLIITNIAVPPIVIRPSVMMDGRSNENDITEKLKKIIQANAILQQESVESQKYQDGYLMLQFEVAQYINSDVKGGPYNQQMSKPLTGFIQRIKGKQGRFRSNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARLLKDAGGTSWNLKVSSRTRRADELKFGDIVHRHLEDGDIVLFNRQPSLHRMSMMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICTYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHANVRVYVNLTVKEKTYGSKLDDRGRELKTMSPDDGFVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYKSDSAAACMNRLAKLSARWIGNHGFSIGIDDVQPKDNLIKGKEKTIEDGYKKCDGYIEAFNKGDLKLAPGCDAAQTLESQIFSTLNGLRDATGKVCMKTLHWRNSPLIMSQCGSKGSAINICQMVACVGQQSVGGCRATNGFIDRNLPHFPKKANTPDAKGFVKDSFFTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGSIVQFCYGDDGMDPAGMEGKDGKPLNFDRLFLRSKAICPGDGDDVILSSSDVRKVLHEKLSEVGMSKLVEKNASDNDIMSEMGFSADFLKSLQSFVEENTKLTETIAEDDSNNLKHLNNFIPRISGISRRQLEVFLDICLSRYRLKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGANNIKTPIITAILEKDDSADVARIVKGRIEKTNLGQVAKSIKVVYSSRLAAVSVSLDMDIIQKADLKIDANTVKESILQTGKLKLKPENIKILDIKKLQVIAQGASRSEILFQLNNLKNLLPSVVVKGVKTVERIVLEIKNKKDKDKVSETYTLLAEGKGLKEVMGIEGVNGHKTVSNHIIEMMNILGIEAARYGIIDQIQFTMKSHGMSIDVRHIMLLADMMTVRGQVLGMTRFGIQKMGRSALMLASFESSTDHLFEASLRGRDDPIEGVSDCIIMGKPIQIGTGMIEVKQRLDPPVLHQGAVPILSRV* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2178 1402 Pfam RNA polymerase Rpb1, domain 4 728 833 IPR007083 GO:0003677|GO:0003899|GO:0006351
Mal7g2178 1402 Gene3D RNA polymerase II, clamp domain 15 137 IPR044893 -
Mal7g2178 1402 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 12 1385 - -
Mal7g2178 1402 Gene3D - 820 878 - -
Mal7g2178 1402 Gene3D - 1335 1380 - -
Mal7g2178 1402 CDD RNAP_III_Rpc1_C 1036 1380 IPR035698 -
Mal7g2178 1402 PANTHER DNA-DIRECTED RNA POLYMERASE 12 1385 IPR045867 GO:0003899|GO:0006351
Mal7g2178 1402 SMART rpolaneu7 249 548 IPR006592 GO:0003677|GO:0003899|GO:0006351
Mal7g2178 1402 Pfam RNA polymerase Rpb1, domain 2 354 520 IPR000722 GO:0003677|GO:0003899|GO:0006351
Mal7g2178 1402 Gene3D RNA polymerase ii 387 447 - -
Mal7g2178 1402 CDD RNAP_III_RPC1_N 33 890 IPR035697 -
Mal7g2178 1402 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 19 1384 - -
Mal7g2178 1402 Pfam RNA polymerase Rpb1, domain 1 23 352 IPR007080 GO:0003677|GO:0003899|GO:0006351
Mal7g2178 1402 Gene3D - 345 527 - -
Mal7g2178 1402 Gene3D - 880 930 - -
Mal7g2178 1402 Gene3D RNA polymerase Rpb1, domain 3 528 701 IPR042102 -
Mal7g2178 1402 Pfam RNA polymerase Rpb1, domain 3 523 702 IPR007066 GO:0003677|GO:0003899|GO:0006351
Mal7g2178 1402 Gene3D - 702 819 IPR038120 -
Mal7g2178 1402 Pfam RNA polymerase Rpb1, domain 5 840 1333 IPR007081 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2178 Mal-Chr7 77733875 77777992 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2178 K03018 - gmx:100811292 2005.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2178 7 77733875 77777992 Mal7g2178 7 77733875 77777992 ECH