Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2147 ATGGCAAAAACCATAACCACCCTTTTATTCTTGCTCCTTGTTGGAGGATTAACCATAACAATGTGTGAAGATGAAGAAAGAGAAGAAGGGTCATCACCAAAAAATTTGTTCTTGATGCAAAACTCAAAGAGTGTTGTTAAGACTGATGCAGGGGAAATGAGATTGTTTAAAAACAATGATGATACGTTTTTGGATAGGCACATGCACATTGGTTTGCTTAATATGGAACCAAAATCCTTGTTCATTCCTCAGTATCTTGACTCCAATTTGATCATATTCATCCGTAGAGGGGTAGCAAAGTTGGGATTCATATATGGAGATAAATTAGAGGAAAGGAGATTGAAGACAGGTGATTTGTATGTAATTCAAGCTGGTACTGTATTCTATTTAGTGAATATAGGTGAAGGTCAGAGACTGCATGTTGTATGCAGCATTGACCCGTCTACAAGCTTTGGAGATACTTTTCAGCCTTTCTATATTGGTGGAGGAGATAATGCACAATCTGTGCTTGCTGGATTCGGACCGACGATTCTTGAATCTGCATTTAATGAATCAAGAACAAAGCTACGGAGAATCTTCACCAAGAAACAAGATGGTCCAATTGTGTTCATTGATGATTCTCATTCTCCTAATCTATGGACAAAATTCCTTCACCTAAAGAAGGATGACAAGGTGCAACAACTTAAGACATTGGTACAAGGCCAAGAAGAAGAGGAAGAGGAGAAGCAAACAAGTTGGTCATGGAGGAAGCTCATGGAAAGTGTATTAGGAAAAGAGAACAAGAAGATAGAGAACAAAGACCGAGCTGATTCCCCTGACTCTTACAACCTCTATGATAGAAAACCTGATTTCAGAAATGCTTATGGTTGGAGCAGTGCATTGGACGGTGGCGATTATTCTCCGCTCAAAATACCTGATATTGGTGTTTTTCATGTCAATCTCACCGCGGGATCAATGATGGCACCTCATGTGAATCCAAGTGCAACAGAATATGGCATAGTGTTAAGGGGTTATGGAAGAATTCAGATACTATTTCCAAACGGAAGCAATGCAATGGAAGCAGAAATCAAAGTAGGAGACATATTCTACATACCAAGATACTTTCCTTTTTGTCAAATAGCAGCAAGAAATGGACCCTTAGAGTTCTTTGGTTTCACAACCACATCAAAAAAGACCTATCCACAGTTTCTTGCAGGTGCTGCATCACTTCTTAAGACCATTTTGGGACCTGAACTAGCAGCTTCATTTGGTGTGAGTGAGGGCACTATGAAGGATGTTGTTTATGCTCAACATGAAGCTGTAATACTTCCTTCAACATGGGCTGCACCTGGTGGAGGAGGGAAAAATGAGGAAGATCATGTTTTGGAGATGATTGAAGAGAAGGTAAATGTTCAAACAAAGGGTTTGTTAATGATGTGA 1419 0.3961 MAKTITTLLFLLLVGGLTITMCEDEEREEGSSPKNLFLMQNSKSVVKTDAGEMRLFKNNDDTFLDRHMHIGLLNMEPKSLFIPQYLDSNLIIFIRRGVAKLGFIYGDKLEERRLKTGDLYVIQAGTVFYLVNIGEGQRLHVVCSIDPSTSFGDTFQPFYIGGGDNAQSVLAGFGPTILESAFNESRTKLRRIFTKKQDGPIVFIDDSHSPNLWTKFLHLKKDDKVQQLKTLVQGQEEEEEEKQTSWSWRKLMESVLGKENKKIENKDRADSPDSYNLYDRKPDFRNAYGWSSALDGGDYSPLKIPDIGVFHVNLTAGSMMAPHVNPSATEYGIVLRGYGRIQILFPNGSNAMEAEIKVGDIFYIPRYFPFCQIAARNGPLEFFGFTTTSKKTYPQFLAGAASLLKTILGPELAASFGVSEGTMKDVVYAQHEAVILPSTWAAPGGGGKNEEDHVLEMIEEKVNVQTKGLLMM* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2147 472 PANTHER OS03G0336100 PROTEIN-RELATED 3 445 - -
Mal7g2147 472 CDD cupin_7S_vicilin-like_C 282 433 - -
Mal7g2147 472 PANTHER OS03G0336100 PROTEIN 3 445 - -
Mal7g2147 472 Pfam Cupin 43 143 IPR006045 -
Mal7g2147 472 Pfam Cupin 275 420 IPR006045 -
Mal7g2147 472 CDD cupin_7S_vicilin-like_N 45 204 - -
Mal7g2147 472 SUPERFAMILY RmlC-like cupins 27 433 IPR011051 -
Mal7g2147 472 SMART Cupin_1_3 34 190 IPR006045 -
Mal7g2147 472 SMART Cupin_1_3 275 424 IPR006045 -
Mal7g2147 472 Gene3D Jelly Rolls 267 439 IPR014710 -
Mal7g2147 472 Gene3D Jelly Rolls 24 216 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2147 Mal-Chr7 76893803 76896607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2147 44 448 Miscellaneous Gene Families AT2G18540 29.369 1.45e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2147 - - gmx:547942 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2147 7 76893803 76896607 Mal7g2147 7 76893803 76896607 ECH
Mal4g0722 4 7986630 7989053 Mal7g2147 7 76893803 76896607 PCT