Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2137 ATGTTATCTTTTGGTAGAAATTGCTTGAAATATTATACCCACATCAAAAGAAATACCTCAAATCAAAATCCATGCTTGCACAAATTTCATAACCTATTTATTCTCACTGATCCAATTGAGAAAAATTCACTTATTAGCTTTAGTTATTATCATTATTATTCAACTAAAACTCCTTCAAGATCTTATAGAAGACGAGCTCGAAACCGGTTTTTAAAATCCAACAAACCTGTTCTAGACCAAGCAAAGTTTCAATTTGCACAATCCCAGCTTCTCCCGCGGTTCACACCGGAAGAATTACGCGATGTTATTGCGAATCAACGCGACCTGTTAGTTTGTTTGGAGCTTTTTCATTGGGCGTCTCACCAGCCGAGGTTTCGCCACAATGTGTCGAGTTTTTATGTCATTATAAAGAAGCTTGGTGATGCTAAAATGTACCAAGAAATGGATGATGTTGTGAATCAGTTGCTTGCTGTTCGTTCGGTTGGTAATGAGGCGTTGTTTAATATGATTATATATTATTTCACTGAGGCGCGGAAGTTGACTAGAGCGGTTATTGTGTTTAAGCATATGAAGTGTAGTAGAAATCCGAATTTCGGGTTTAGGCCTTCTATTAAAACGTATAATATTCTTTTTGGTGCGCTTTTGAGTAGAGGGTACAATACTGATATAAACCTTGTGTATATGGATACTATGAGATGTCTGTTCAGGCAAATGGTCAACGATCATATAGAACCTGATATTTTTTCGTTGAATTCCATGATAAAAGGTTACGTGCTTTCTCTTCATGTTAACGATGCGTTGAGGATATTTCATCAGATGGGTGTGGTTTATGATTGCAAACCCAATTCTTTAACTTATGATTACTTGATTCATGGGTTGTGTGCCAAAGGAAGAACGGAGAATGCTAAAGAGTTGTATCATGAAATGAAGACCAAAGGTTTTGTTCCAAATAGTAAATCTTATAATTCGCTTGTCAGTTCTTTGGCACTCATCGGAGAGGTTGAGGAAGCAGTAAATTATCTATGGGAGATGACTGACAAGCAAAGATCAGTTGACTTTATTACATACAGGACTGTACTTGATGAGATATGTAGACGAGGAAGAGTTCAAGAGGCCATGCGGTTTCTGCAGGAGTTGCAAGAAAAGGACCTTGTAGATGGGCATACTTACAAGAAGCTTCTTTATGTGCTCGAAGATGATTATGGGAATTCAGAAAACAGAATTGATTCAGGTCCAGTTTTAATCTCACCTTGA 1254 0.3732 MLSFGRNCLKYYTHIKRNTSNQNPCLHKFHNLFILTDPIEKNSLISFSYYHYYSTKTPSRSYRRRARNRFLKSNKPVLDQAKFQFAQSQLLPRFTPEELRDVIANQRDLLVCLELFHWASHQPRFRHNVSSFYVIIKKLGDAKMYQEMDDVVNQLLAVRSVGNEALFNMIIYYFTEARKLTRAVIVFKHMKCSRNPNFGFRPSIKTYNILFGALLSRGYNTDINLVYMDTMRCLFRQMVNDHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKTKGFVPNSKSYNSLVSSLALIGEVEEAVNYLWEMTDKQRSVDFITYRTVLDEICRRGRVQEAMRFLQELQEKDLVDGHTYKKLLYVLEDDYGNSENRIDSGPVLISP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2137 417 PANTHER ATPASE EXPRESSION PROTEIN 3 34 409 - -
Mal7g2137 417 TIGRFAM PPR: pentatricopeptide repeat domain 249 282 IPR002885 -
Mal7g2137 417 TIGRFAM PPR: pentatricopeptide repeat domain 354 384 IPR002885 -
Mal7g2137 417 TIGRFAM PPR: pentatricopeptide repeat domain 285 318 IPR002885 -
Mal7g2137 417 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Mal7g2137 417 PANTHER PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 34 409 - -
Mal7g2137 417 Pfam PPR repeat family 281 329 IPR002885 -
Mal7g2137 417 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Mal7g2137 417 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Mal7g2137 417 Pfam PPR repeat 249 273 IPR002885 -
Mal7g2137 417 Pfam PPR repeat 354 383 IPR002885 -
Mal7g2137 417 Gene3D Tetratricopeptide repeat domain 262 407 IPR011990 GO:0005515
Mal7g2137 417 Gene3D Tetratricopeptide repeat domain 69 232 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2137 Mal-Chr7 76380247 76381825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2137 116 394 Glycosyltransferase AT1G05670 21.656 2.21e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2137 - - gmx:102666460 585.489