Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2101 ATGCTGCTAAATCATAAACGACTCGTCGTTTTCCTCTCCCTCACCACTCTTCTTCTCATTTCTTCATTCTCTTTTACTCTATCCGAAAAAACCCAAAACGACGACGATGATGAAGATCTCAGCTTCCTCGAAGAACCAGAAGACACCACTACCACTCACCACAACCACGCAGATTTCCCAGATCTCGATCAATTCGACGCTGACGACGAAGGCGACGATGGTGACGAATTCGGCGACTTCTCCGGCTACGATCCTCACTCCGATGAAGACTTCAAGGAACCAGAAGTGGATGAGAAAGATGTTGTCGTTTTGATTGAGAGAAATTTTACAACGGTGATTGAAAATAATCAATTTGTGATGGTTGAATTTTATGCTCCGTGGTGTGGCCATTGTCAAGCTTTGGCGCCGGAGTATGCTGCGGCGGCGACGGAGTTGAAGAAGGATGGTGTTGTTTTGGCTAAGGTGGATGCTTCGGTTGAGAATGATTTGGCTCATGAGTATGATGTTCAGGGTTTTCCTACTGTTTACTTTTTCATCGATGGGGTTCATAAGCCTTACGGTGGCCAAAGAACCAAAGATGCTATAGTGACATGGATTAAGAAGAAGATAGGACCTGGTGTATACAACATAACTACATTGGATGATGCTGAAAGCATATTGACCTCTGAAACTAAAGTTGTTTTGGGATTCCTTGACTCCTTAGTCGGTGCTGAGAGTGACGAGCTAGCTGCAGCATCAAAACTTGAGGATGGCGTCAATTTTTACCAAACCGTGATTCCTAATGTGGCTAAGCTTTTCCATATTGACCCAGATGTCAAGCGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGCCAGTTTGTAAAAGCGGAAATAGCTAAATTTGTATCCTCCAACAAACTTCCGTTGGTCACAACTTTTACAAGGGAAAGTGCCCCAGTAATTTTTGAAAGTCCAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAATGATACAGCGAAGTTCATTACAGTATTTCAAGAAGCAGCAAAGCATTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTATCTCTGGAAATACTCCCAAAGTACTTGCATTCACAGGAAATGATGATGGCAGAAAATTTTTGCTCGATGGAGAGGTGACCATTGACAATATTAAGGCATTTGGAGAAAATTTCCTTGTAGACAAGCTAAAACCTTTTCTCAAGTCAGATCCAATTCCCGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGTAATAACTTCGACGAAATTGTCTTGGATGAGTCAAAGGATGTTCTACTTGAGGTTTATGCTCCTTGGTGTGGCCATTGCCAAGCCTTGGAACCAACATACAACAAGCTCGCAAAACATCTTCGTAGCATTGAATCTATTGTAGTAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGATGGGTTCCCCACTCTCCTATTTTACCCAGCAGGAAAAAAGAGTTCCGACCCTATTACTGTTGATGTGGATCGTACAGTGGTGGCTTTTTATAAGTTTCTCAAGAAACACGCGTCAATCCCATTCCAACTTCAGAAACCAACCACAACTTCTAAAACCGACGGTAGTGGGAGTTCTGACGTCAAGGAAAGTCAGAGTAGCAGCACAAACGTGAAGGATGAATTATGA 1749 0.4254 MLLNHKRLVVFLSLTTLLLISSFSFTLSEKTQNDDDDEDLSFLEEPEDTTTTHHNHADFPDLDQFDADDEGDDGDEFGDFSGYDPHSDEDFKEPEVDEKDVVVLIERNFTTVIENNQFVMVEFYAPWCGHCQALAPEYAAAATELKKDGVVLAKVDASVENDLAHEYDVQGFPTVYFFIDGVHKPYGGQRTKDAIVTWIKKKIGPGVYNITTLDDAESILTSETKVVLGFLDSLVGAESDELAAASKLEDGVNFYQTVIPNVAKLFHIDPDVKRPALVLLKKEEEKLNHFDGQFVKAEIAKFVSSNKLPLVTTFTRESAPVIFESPIKKQLLLFVTSNDTAKFITVFQEAAKHFKGKLIFVHVEMDNEDVGKPVADYFGISGNTPKVLAFTGNDDGRKFLLDGEVTIDNIKAFGENFLVDKLKPFLKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEVYAPWCGHCQALEPTYNKLAKHLRSIESIVVAKMDGTTNEHPRAKSDGFPTLLFYPAGKKSSDPITVDVDRTVVAFYKFLKKHASIPFQLQKPTTTSKTDGSGSSDVKESQSSSTNVKDEL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2101 582 SUPERFAMILY Thioredoxin-like 434 546 IPR036249 -
Mal7g2101 582 SUPERFAMILY Thioredoxin-like 306 436 IPR036249 -
Mal7g2101 582 CDD PDI_b'_family 318 418 - -
Mal7g2101 582 MobiDBLite consensus disorder prediction 79 95 - -
Mal7g2101 582 MobiDBLite consensus disorder prediction 552 573 - -
Mal7g2101 582 Gene3D Glutaredoxin 88 203 - -
Mal7g2101 582 TIGRFAM pdi_dom: protein disulfide-isomerase domain 105 202 IPR005788 GO:0003756
Mal7g2101 582 MobiDBLite consensus disorder prediction 46 62 - -
Mal7g2101 582 Gene3D Glutaredoxin 308 432 - -
Mal7g2101 582 SUPERFAMILY Thioredoxin-like 94 204 IPR036249 -
Mal7g2101 582 Gene3D Glutaredoxin 204 307 - -
Mal7g2101 582 MobiDBLite consensus disorder prediction 552 582 - -
Mal7g2101 582 CDD PDI_a_PDI_a'_C 439 541 - -
Mal7g2101 582 MobiDBLite consensus disorder prediction 30 95 - -
Mal7g2101 582 CDD PDI_a_family 102 199 - -
Mal7g2101 582 ProSiteProfiles Thioredoxin domain profile. 417 546 IPR013766 -
Mal7g2101 582 ProSitePatterns Thioredoxin family active site. 459 477 IPR017937 -
Mal7g2101 582 MobiDBLite consensus disorder prediction 63 78 - -
Mal7g2101 582 SUPERFAMILY Thioredoxin-like 207 318 IPR036249 -
Mal7g2101 582 TIGRFAM ER_PDI_fam: protein disulfide isomerase 99 582 IPR005792 GO:0003756
Mal7g2101 582 ProSitePatterns Thioredoxin family active site. 120 138 IPR017937 -
Mal7g2101 582 PANTHER PROTEIN DISULFIDE ISOMERASE 3 574 - -
Mal7g2101 582 Pfam Thioredoxin-like domain 242 413 - -
Mal7g2101 582 CDD PDI_b_family 207 306 - -
Mal7g2101 582 ProSiteProfiles Thioredoxin domain profile. 82 204 IPR013766 -
Mal7g2101 582 Pfam Thioredoxin 439 524 IPR013766 -
Mal7g2101 582 Pfam Thioredoxin 101 201 IPR013766 -
Mal7g2101 582 Gene3D Glutaredoxin 433 547 - -
Mal7g2101 582 PRINTS Thioredoxin family signature 127 136 - -
Mal7g2101 582 PRINTS Thioredoxin family signature 119 127 - -
Mal7g2101 582 PRINTS Thioredoxin family signature 168 179 - -
Mal7g2101 582 PANTHER PROTEIN DISULFIDE-ISOMERASE 3 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2101 Mal-Chr7 75192672 75197894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2101 K09580 - gmx:100790223 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2101 7 75192672 75197894 Mal7g2101 7 75192672 75197894 ECH
Mal4g0694 4 7603098 7606706 Mal7g2101 7 75192672 75197894 PCT