LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g2091	ATGTCATCATCATCTCAATCCACCGAACCAGTTACAGAAGAAAGAGAAATTGATATTCGAACTTCAATCGAACCCGGTTCAGATACCGCGTGGGTGAGAACCGGTTCAGACCAAGAAATGGATCTCCCTTCTAGCCCTAGTAGTAGCGGTTACGCTGGCGAAGGAGGTGGTAGCACTAGTGCCACCACTGGTTCCGCAATTGAGATCGAACACGATGATGAAATTGAAGAAGAAGATGATGAAGAACAATTGAGGATTCGAAATCAAATTGATGAAATTTCGATCACTGATTCTAATACCGATTGGATTCCTGGAAAACGACATCAAGATGAGGATGATGGTTCTATATCATGGAGAAAAAGGAAGAAACATTTCTTTATTCTTAGCAATTCCGGAAAGCCTATATATTCTAGATATGGAGATGAACACAAGCTTGCAGGGTTTTCAGCTACTTTGCAAGCAATCATTTCCTTCGTCGAGAACGGGGGTGATTCTGTCAAGCTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTGGTGAAAGGACCAATTTACTTGGTCTGCATCAGCTCCACGGAAGAACCTTATGAGTCATTAAGGGGGCAATTGGAACTGATTTATGGCCAGATGCTTGTTATATTAACAAAATCGGTAAACAGATGTTTTGAGAAGAATCCAAAGTTCGATATGACACCCTTACTTGGTGGAACAGACACCGTCTTCTCTTCTTTAATCCACTCTTTCAGTTGGAACCCAGCCACATTTCTTCATGCCTATACTTGCCTTCCTCTTTCTTATGCAACAAGGCAAGCTGCCGGTGCTGTCTTGCAAGACACTGCTGATTCTGGTGTTTTGTTTGCAACACTGATGTGCAGGCACAAGGTGATTAGTCTTGTTGGCGCTCAGAAAGCTTCCCTTCATCCAGATGATATGCTGCTGTTGGCCAACTTTGTCATGTCATCAGAATCCTTCAGGACGTCAGAATCATTTTCTCCAATTTGCTTGCCAAGATATAACCCTTCAGCGTTTTTGTATGCTTATATCCATTATTTTGATGCCGACACATACTTGATGTTGCTAACCACTAATTCAGATGCATTTTATCATCTTAAGGATTGCCGGATTCGCATTGAAACGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGAGGAATGCATGTCGAGGATCTACCACCAATACCTCAGTCTGGAGCATCTCATTTGGGCCAGCACATGCTTCCATCAGATTCTCCTGAAAGATTTAAGGAACCTCATCATGGCATTGGAGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATACCTGGATCAATATGTGTCTTCAGAGTTTTCTTCATCAATTAGTACTCATCAACAGCAGAAAAGATTGTATAGAGCTTACCAGAGACTTTTTGCATCAATGCATGATAAAGGAATCGGACCGCACAAAACTCAATTTAGAAGAGATGAAAACTATGTTCTTTTATGTTGGGTGACACAGGATTTTGAGCTTTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACATGCAACCGTGTTTGTCAATGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA	1665	0.421	MSSSSQSTEPVTEEREIDIRTSIEPGSDTAWVRTGSDQEMDLPSSPSSSGYAGEGGGSTSATTGSAIEIEHDDEIEEEDDEEQLRIRNQIDEISITDSNTDWIPGKRHQDEDDGSISWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDSVKLVRAGKHQVVFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTKSVNRCFEKNPKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHAYTCLPLSYATRQAAGAVLQDTADSGVLFATLMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMHVEDLPPIPQSGASHLGQHMLPSDSPERFKEPHHGIGGPAGLWHFIYRSIYLDQYVSSEFSSSISTHQQQKRLYRAYQRLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWIKDVENEIFLLGASPFSW*	555

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g2091	554	PANTHER	SAND PROTEIN-RELATED	41	554	IPR004353	GO:0006623
	Mal7g2091	554	MobiDBLite	consensus disorder prediction	27	66	-	-
	Mal7g2091	554	PANTHER	BNAC04G15860D PROTEIN	41	554	-	-
	Mal7g2091	554	Pfam	Third Longin domain of FUZ, MON1 and HPS1	440	541	IPR043970	GO:0016192
	Mal7g2091	554	Pfam	Second Longin domain of FUZ, MON1 and HPS1	284	375	IPR043971	GO:0016192
	Mal7g2091	554	Pfam	First Longin domain of FUZ, MON1 and HPS1	123	244	IPR043972	GO:0016192
	Mal7g2091	554	MobiDBLite	consensus disorder prediction	1	66	-	-
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	519	532	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	226	238	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	303	319	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	175	189	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	279	292	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	123	140	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	356	382	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	328	351	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	503	517	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	255	276	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	532	552	IPR004353	GO:0006623
	Mal7g2091	554	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	141	161	IPR004353	GO:0006623

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g2091	Mal-Chr7	74921428	74926603	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g2091	K20195		-	gmx:100814534	853.588

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g2091	7	74921428	74926603	Mal7g2091	7	74921428	74926603	ECH
	Mal4g0685	4	7423002	7428522	Mal7g2091	7	74921428	74926603	PCT