LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g1990	ATGCAGCCGAATTTATTATTTCCATTCGGAAGCGCGTTGAGTAATCCGTTTATATTGAACGGTGGTGATTTGAGTGAAGAAGGTGGAATCGATAGTTCTAGGGTTTTGGTTTTGCTTCCTTTCTTCTTGCTCTCTCAAGGAGGAGCAATGGATTTGTCTAAAGTTGGTGAAAAGATTTTCAGTTCTGTTAAGTCCGCTAGATCGCTTGGTTTACTTCCTTCTCTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGTTGCTGCAGCTGCCGTAGCTCGTGCTCTTGCAGGGTTACCTCCCCATCAGAGGTATAGTCTTTCATCAAGTTCAGAAGAGCTGAGCTCAATATATGGAAGCAGACCTCATGGCCCTGTTGTGGAGGAACTGGAGGATGAATTCTATGAAGAGGATTTTGATCCAATTAGGCATGTTTTGGAGCATGTCCCATCTGAAGAAAATGAGCTATCATATTTTGAAAAGCAGGCTGCCCTTAGATTAACACAACTGGATAAAGTAGCAGAGCATTTGTCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAATTGGAGAAAGACTTGAGAATTGCTAATGTCATCTGTATGAATGGAAGACGGCACCTGACATCTTCTATGAACGAGGTTTCAAGGGATTTGATTGTGAACTCTTATTCAAAAAAGAAGCAAGCACTAGTGGACTTGCTTCCAGTCTTGACTGAACTTCTACGTGCATTAGACATGCAATCAACACTTGAATCCCTTGTAGAGGAAGGGAATTATTGGAAGGCATTTCAAGTCCTATCGGAGTATTTGCAACTCTTAGATAGTTTCTCAGAGCTTTCTGCCATGCAAGAAATGAGTCATGGTGTGGAGGTTTGGCTGGGAAGAACTTTGCAGAAATTGGATGCTCTTTTATTGGATGTATGCCAGGAATTTAAGGAATATGATTATATGACAGTAATTGATGCGTATGCATTGATAGGGGATACCACCGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTCATATCAAAGACGCACTTGGTGCTAAAGACAATCGTGCATGAGGATGAGGAGGGACTTGCGCAAAATAGTAGGCTTACTTACAGCGACCTATGCCTTCAGATACCTGATTCTAAGTTTAGGCAGTGCTTACTAAGAACATTGGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTTCAGCTAGAGAGAAAGGACTCGGCAGCACAAACCTCTGAGAAGTGCAATGAAGACATTTCTTGTAGTTTAGGCGAGGCTAAGGAAGTTGGTTCAGTTGTACGAGCCTGCAACAATTCTATTACCAGTTCTGGGGATGTGATACATGACTCATCTTCTAGAGAGGAATCTTCAACAATCAGCGCACTGACTGAAACTATTGGTTCACCATACAGTGATTTTCATGATCCAGTGAATGAGGCTAGAAAGGAGGAAAGTTCAGCATCAAGCATCGATTCCCCATGGTACCATCTTCGGAAAGAAGCTACAACATTTGTTTCTCAGACCCTTCAAAGAGGACGCAAGAATCTGTGGCATCTTACTGCAAGTCGTGTCTCAGTGTTGCTTTCTTCTACTGCAGCTTGTTCTGCAAGCATTCATCAATTCTTGAAAAACTATGAAGATCTGAGTGTATTCATTTTGACTGGTGAAGCCTTCTGTGGAATTGAAGTGGTTGAATTTAGGCAAAAGTTGAAGGTTGTTTGTGAAAACTATTTCATAGCATTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTGGAGAAGGAGACTTGGTTAAAATTACCTCAAGATACTGTTCAGATTATCAGTTTTGCTGGACTTATTGGTGATGGAGCACCATTGATTTCTTTATCTGTCAGTAAATCAATGAATGTCAGTGCAATCCATTCCAATAATAAATCAGTGAACATGGTTCACGCTGGTGCGAGGAAGAGTGGGTTCTCTCATTGGATTAAAAATGGAAATCCTTTTCTGCAAAAATTATCAACCTCCAAAGAAGGTCATGGTATTCCCCAACCTAATGGGTCAAGTTATGGTGAATTTGATGGAGGCTCGGCCAACAACTATCATGATGATAAAGTCTCCCCTAGAAATAATGACTTCAGTCAATTGAATGGTGCCAACTCTGTTTCAGAAGATGAAAATGAAGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTTCCAAGTCGAAGTTCTAAATCCCGTCTTTCAAGATCTCACTCTTCACATGGTAATGACGAAGAGAGTACAGCACAAACTGGATCTTCTCTATGTCTTTTAAGGTCTATGGACAAATATGCAAGGCTAATGCAGAAATTAGAAGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTATGAAATTTTTTTCTATTTTATATATGAAATATTTGGTCAGCAGAATACTAATTCAAGTGGAAAAAGCTCAGTTAACTCTCTTAATTATCGCTTAAGGACAGCCTTATCTAGAATAAACCAAGATTGCGAGGAGTGGCTTAAGCCCCACTCATCTTCACCAACAACAAGTTCATCATTTGTACATGCAGAGTTGACACCCACAAATCCTTCAAATATGAATTTTGGTCACCCCTCGGGGACTGCCTTTAGTCTTAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTCGTTGCTCGAATACTAAATAGATCCAAAGCTCACCTCCAGTCAATGCTCTTGCAAAGTAATTCAACTGTACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTATAGAGCATGTGCATCACACAACAGTAAGACTACTGCTGCACATTAATGGGTATGTTGATCGTGTTGCCAATTGTAAATGGGAAGTAAAAGAACTTGGAATGGAGCATAACGGGTATGTTGATTTGCTACTGGGGGAGTTTAAGCACTTTAAAACACAACTTGCTCATGGAGGAATTCGCAAAGAGACTCAAGACACATTGTTGGACTATGGGCTTGACATTGTTGCGGAAACTCTTGTGGAAGGACTTTCACGGGTGAAGAGATGTAATGATGAAGGACGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATAAATGGGCTAAAGCATTTTGCTTCATTGAATGTGAAGTCCAAGCTACAAATGGTTGAAACTTTCATTAAGGCTTACTACCTTCCGGAGACAGAATACGTGCACTGGGCACGAGGGCACCCGGAATATAGTAAGAGCCAGGTTGTGGGATTGGTCAACCTTGTTGCCTCTATGAAAGGTTGGAAGAGGAAAACAAGGTTGGAAATACTGGAAAAGATCGAGTGA	3375	0.4086	MQPNLLFPFGSALSNPFILNGGDLSEEGGIDSSRVLVLLPFFLLSQGGAMDLSKVGEKIFSSVKSARSLGLLPSLSDRPEVPARAVAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPHGPVVEELEDEFYEEDFDPIRHVLEHVPSEENELSYFEKQAALRLTQLDKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALVDLLPVLTELLRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSFSELSAMQEMSHGVEVWLGRTLQKLDALLLDVCQEFKEYDYMTVIDAYALIGDTTGLAEKIQSFFMQEVISKTHLVLKTIVHEDEEGLAQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDSAAQTSEKCNEDISCSLGEAKEVGSVVRACNNSITSSGDVIHDSSSREESSTISALTETIGSPYSDFHDPVNEARKEESSASSIDSPWYHLRKEATTFVSQTLQRGRKNLWHLTASRVSVLLSSTAACSASIHQFLKNYEDLSVFILTGEAFCGIEVVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPQDTVQIISFAGLIGDGAPLISLSVSKSMNVSAIHSNNKSVNMVHAGARKSGFSHWIKNGNPFLQKLSTSKEGHGIPQPNGSSYGEFDGGSANNYHDDKVSPRNNDFSQLNGANSVSEDENEDLLADFIDEDSQLPSRSSKSRLSRSHSSHGNDEESTAQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLYEIFFYFIYEIFGQQNTNSSGKSSVNSLNYRLRTALSRINQDCEEWLKPHSSSPTTSSSFVHAELTPTNPSNMNFGHPSGTAFSLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLIEHVHHTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGEFKHFKTQLAHGGIRKETQDTLLDYGLDIVAETLVEGLSRVKRCNDEGRALMSLDLQVLINGLKHFASLNVKSKLQMVETFIKAYYLPETEYVHWARGHPEYSKSQVVGLVNLVASMKGWKRKTRLEILEKIE*	1125

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g1990	1124	Pfam	Vacuolar-sorting protein 54, of GARP complex	126	415	IPR019515	-
	Mal7g1990	1124	Pfam	Protein of unknown function C-terminus (DUF2451)	894	1124	IPR019514	-
	Mal7g1990	1124	PANTHER	UNCHARACTERIZED	42	1124	IPR040047	GO:0032456\|GO:0042147\|GO:1990745
	Mal7g1990	1124	MobiDBLite	consensus disorder prediction	683	730	-	-
	Mal7g1990	1124	PANTHER	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED	42	1124	-	-
	Mal7g1990	1124	MobiDBLite	consensus disorder prediction	745	778	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g1990	K23288		-	gmx:100788476	1822.75

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g1990	7	71474649	71493311	Mal7g1990	7	71474649	71493311	ECH