Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1987 ATGGCACCGATTCCGCCTGAGAACGGCGTCGACGGCGACGACGAACGAGAAGAAGACGAAGAAGATGAAGAAGAAGACGAAGAAGATGAAGAAGTTGAAGATGATGATGAAGAAGAGCCGAGGTTGAAGTACCAGAGAATGGGAGGGAGCGTTCCTTCGTTGTTAGCTACTGATGCCGCGTCGTGTGTTGCGGTTGCTGAAAGGATGATCGCGCTTGGTACTCATGCTGGGACTATTCATATTCTTGATTTTCTCGGGAATCAGGTGAAAGAATTCTCTGCCCATGCTTCTGTTGTGAATGACCTTAGCTTTGACTTGGAAGGGGAATATATTGGAAGCTGTTCTGATGACGGAACAGTTGTTATAAACAGCCTTTTTACTGATGAGATCATGAAATTTGAGTACCATCGGCCAATGAAGGCGGTTGCATTGGACCCTGATTATGCAAGGAAAATGTCTAGGAGGTTTATTGCTGGTGGTTTAGCTGGTAATTTATATTTAAATTCGAAGAAATGGTTGGGCTATCGGGACCAGGTTTTGCACTCTGGTGAAGGTCCAATACATGCTGTGAAGTGGAGAGCAAGTCTTGTTGCTTGGGCCAATGATGCAGGAGTGAAGGTTTATGATACTGCCAATGATCGGCGAATAACATTTATTGAAAAACCACGAGTGTGCCCACACCCTGAGCTTTTGCTTCCTCACTTGGTTTGGCAGGACGACACCGTCTTAGTTATTGGCTGGGGAACATCAGTCAAAATTGCCTCAATAAAGACAAATCACCATAAAGCCACCAATGGGGCGTACTTGCAAGTTCCTGTGCTTGGTATGACCCAGGTGGATATTGTGGCATCTTTTCAAACCAGCTATTTCATCTCAGGACTTGCCCCTTTTGGTGATTCTTTGGTTGTTCTTGCTTATATTCCTGGAGAAGAAGACGGCGATAAGGATTTTAGTAGCACTGCTCCTTCACGGCAGGGCAATGCACAAAGACCTGAAGTAAGAGTAGTATCATGGAATAATGATGAACTTTCAACAGATGCGCTACCAGTACATGGATTTGAGCATTACAAGGCAAAGGACTACTCTCTTGCTCACGCTCCCTTCTCAGGTAGCAGTTATGCTGGTGGTCAGTGGGCTGCAGGCGATGAACCACTGTACTATATTGTATCCCCAAAGGATGTAGTTATTGCAAAGCCAAGGGATACTGAAGATCATATTGCTTGGCTTCTTCAACATGGATGGCATGAAAAAGCTTTAGCTGTGGTTGAATCTAGTCACGGACGCAGTGAACTACTTGATGAGGTGGGATCTAGGTATCTTGATCATCTGATTGTGGAAAGAAAATACGGTGAAGCAGCTTCTCTGTGTCCCAAGTTACTGCGAGGATCAGCTTCGGCGTGGGAGAGATGGGTCTTCCACTTTGCACATCTGCGCCAACTTCCTGTTTTGGTTCCTTACATGCCTACAGAAAACCCCAGACTACGTGATACTGCTTATGAGGTTGCTCTTGTTGCATTGGCTACAAGTCCATCTTTCCATAAGGATCTCTTATCCACTGTGAAATCCTGGCCATCTGTAATTTATTCTGCGCTACCTGTTATTTCAGCTATTGAACCACAGCTAAATACTTCGTCCATGACTGATTCACTCAAGGAGGCATTAGCAGAGTTGTATGTAATTGATGGGCAATATGAGAAAGCCTATTCATTGTATGCAGATCTTATGAAGCCAGAAGTATTTGATTTTATTGATAAACACAACCTACATGATGTAATTCAAGAAAAGGTTGTCCAACTGATGATGCTAGATTGCAAGCGTGCAGTTCCTCTGTATATCCAGAATAGGGAATTAATAAGTCCTCCTGAGGTTGTAAAGCAACTTCTAAACGCCGATAACAAGTCTGATTGCAGACATTTTTTACATTTGTATCTCCATTCACTATTTGAAGTAAATCCACATGCTGGGAAAGATTTCCATGATATGCAGGTAGAACTCTATGCAGACTATGATCCGAAGATGCTTCTACCTTTTCTTCGCAGCAGTCAACACTATACCCTTGAGAAGGCTTACGAGATTTGCATCAAAAGAGATTTGATGAGAGAGCAAGTCTTCATCTTAGGAAGAATGGGAAACTCAAAAAAAGCCCTAGCTGTTATTATAAACAAATTGGGGGATATAGAGGAGGCTGTAGAGTTTGTTACCATGCAGCATGATGATGAACTCTGGGAAGAATTAATCAAGCAATGCATTCACAAACCTGAGATGGTGGGCATACTATTGGAGCACACAGTTGGAAATCTTGATCCCCTTTACATTGTAAATAAGGTTCCTAATGGGTTGGAAATACCTAGGCTCAGGGATCGGCTAGTGAAAATTATCACTGATTACAGGACGGAAACATCACTCAGACATGGGTGCAATGATATCCTTAAGGCGGACTGTGTCAATCTTTTAATCAAGTATCACAAAGAGGCAAGGCATGGAATTTCTTTAGGTAATGAAGGAGATGAGCCACGAGTTAATATGAGTGATCATCGTGCCTCTCAGGCATTTGAGAAATCCCTAAGTCTGAGAACCATGGAAATGAAATCGAAGACTAGGGGAGGGGGAAGATGTTGTATATGTTTTGACCCATTTTCTATACAGAATGTATCAGTCATTGTTTTCTTTTGCTGTCATGGTTATCACACAACTTGTCTCACTGATTCATACTACACTAGTAGTACGAAAGATATTGAACCCACTTCCCAAGAGGCAGAAACATATGATGATTACAATGGTTATGCGGATGATGCCAGCGATGAAAATGAAGAAGAAACCAAGTCGGATGGTCCTCGTATGCGTTGTATTTTGTGTACTACTGCTGCTGGTTGA 2874 0.4283 MAPIPPENGVDGDDEREEDEEDEEEDEEDEEVEDDDEEEPRLKYQRMGGSVPSLLATDAASCVAVAERMIALGTHAGTIHILDFLGNQVKEFSAHASVVNDLSFDLEGEYIGSCSDDGTVVINSLFTDEIMKFEYHRPMKAVALDPDYARKMSRRFIAGGLAGNLYLNSKKWLGYRDQVLHSGEGPIHAVKWRASLVAWANDAGVKVYDTANDRRITFIEKPRVCPHPELLLPHLVWQDDTVLVIGWGTSVKIASIKTNHHKATNGAYLQVPVLGMTQVDIVASFQTSYFISGLAPFGDSLVVLAYIPGEEDGDKDFSSTAPSRQGNAQRPEVRVVSWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHIAWLLQHGWHEKALAVVESSHGRSELLDEVGSRYLDHLIVERKYGEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATSPSFHKDLLSTVKSWPSVIYSALPVISAIEPQLNTSSMTDSLKEALAELYVIDGQYEKAYSLYADLMKPEVFDFIDKHNLHDVIQEKVVQLMMLDCKRAVPLYIQNRELISPPEVVKQLLNADNKSDCRHFLHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLMREQVFILGRMGNSKKALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCIHKPEMVGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYHKEARHGISLGNEGDEPRVNMSDHRASQAFEKSLSLRTMEMKSKTRGGGRCCICFDPFSIQNVSVIVFFCCHGYHTTCLTDSYYTSSTKDIEPTSQEAETYDDYNGYADDASDENEEETKSDGPRMRCILCTTAAG* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1987 957 SUPERFAMILY RING/U-box 865 909 - -
Mal7g1987 957 PANTHER VACUOLAR PROTEIN SORTING VPS41 3 957 IPR045111 GO:0006623
Mal7g1987 957 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG 3 957 - -
Mal7g1987 957 MobiDBLite consensus disorder prediction 1 41 - -
Mal7g1987 957 Gene3D Tetratricopeptide repeat domain 545 817 IPR011990 GO:0005515
Mal7g1987 957 Gene3D - 7 267 IPR015943 GO:0005515
Mal7g1987 957 MobiDBLite consensus disorder prediction 924 938 - -
Mal7g1987 957 SMART CLH_2 611 758 IPR000547 GO:0006886|GO:0016192
Mal7g1987 957 Pfam Region in Clathrin and VPS 613 754 IPR000547 GO:0006886|GO:0016192
Mal7g1987 957 SUPERFAMILY WD40 repeat-like 57 264 IPR036322 GO:0005515
Mal7g1987 957 PIRSF Vps41 1 913 IPR016902 GO:0034058|GO:0046907
Mal7g1987 957 SMART ring_2 872 952 IPR001841 -
Mal7g1987 957 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 611 758 IPR000547 GO:0006886|GO:0016192
Mal7g1987 957 SMART WD40_4 85 124 IPR001680 GO:0005515
Mal7g1987 957 SMART WD40_4 173 209 IPR001680 GO:0005515
Mal7g1987 957 MobiDBLite consensus disorder prediction 11 38 - -
Mal7g1987 957 MobiDBLite consensus disorder prediction 907 944 - -
Mal7g1987 957 MobiDBLite consensus disorder prediction 907 922 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1987 K20184 - gmx:100804340 1738.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1987 7 71412988 71433200 Mal7g1987 7 71412988 71433200 ECH