Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1670 ATGTCGACGCTAGATTCCGACGTAACCATGGTTCCCGCCGGCGAAGCTTCAAGCAGTGCCGCCGGTCCTTCTTCCAAGAAACCCAAACATTTCGAGATCAAGAAGTGGAACGCTGTTGCTCTCTGGGCTTGGGATATCGTTGTTGATAATTGTGCTATTTGCCGTAACCATATCATGGATCTCTGTATTGAGTGTCAAGCTAATCAGGCTAGCGCGACTAGCGAGGAATGTACTGTGGCTTGGGGGGTTTGTAATCATGCTTTTCACTTCCATTGCATTAGTAGATGGCTCAAGACTCGTCAAGTGTGTCCTCTAGACAACAGTGAGTGGGAGTTTCAGAAATATGGCCACTAG 354 0.4802 MSTLDSDVTMVPAGEASSSAAGPSSKKPKHFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1670 117 SUPERFAMILY RING/U-box 30 114 - -
Mal7g1670 117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 117 IPR013083 -
Mal7g1670 117 MobiDBLite consensus disorder prediction 1 28 - -
Mal7g1670 117 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RBX1 1 117 - -
Mal7g1670 117 CDD mRING-H2-C3H2C2D_RBX1 49 110 - -
Mal7g1670 117 ProSiteProfiles Zinc finger RING-type profile. 62 107 IPR001841 -
Mal7g1670 117 PANTHER RING BOX 1 117 - -
Mal7g1670 117 Pfam RING-H2 zinc finger domain 49 107 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1670 Mal-Chr7 57388635 57390776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1670 K03868 - gmx:100789570 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1283 4 18561633 18565798 Mal7g1670 7 57388635 57390776 PCT