Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1598 ATGGAAACAAGATCTGCAAAACGCAAAAAGATAGCTCAGATAGAAAAACAAAACAATGCCAAATCAAAACAATTAACAGATCGAATTAGTGATCTTCCTGATGATATTATTCATCATATCCTTCTTTTACTTCCCATTAAATGTGTTGCACAAATGAGTGTTCTTTCAAAGAGATGGAAATTTCTTTGGACAACTTTTCCTCATCTTGATTTTACAACCCTTGATCCATTTCCACTTATTTCAACAAAAAATCATAAGATTATATCAAGACACCCTTTATCTTCATCAAAACATGATTTCATCACCCAAGTTCTTTCTATTCGCGACGTAAAACATAAAGACATAAGAGTCCTTTGTTTTCGTGCATCTTTGAGTTTTTCGCGTTTAAATAATTTGGTTCGTAATGCCATTAGGCATAATGTTAGAGAACTTGATATTGAAGTTCACACAGAAGTAGATACCGATGATTTTTTCAACTTTCCTAGATGTGTTATTAGTAGCGAATCATTAAGAGTTTTGAAATTGAAATCAGGTTTTCGTTTGCCTCCATCATCGGTTATGAGAAACGGATTTCAATCTTTGCATACATTGTCACTATCTCTAATTATCTTGTATAATCAACCTTCTCTATCCGATCTGTTCTGCGAATCCTCTTTTCCTCTTTTGAGAAATTTGCACCTTGATATGTGTTTTGGATTAACACATCTTCGTATTGGTTGTCGCGCTCTAGAAGATTTGAATTTGGAAAGATGTTATGAGCTACAAGGTTTGGAAGTTTGTGGTGCAAAAATTAAAAGAATGAGAGTAATAAGTTGTTTTGATGCTTATTGTGACAAAACTTGGGTGAGATTGAATGTGCCAAACCTTGAAAGTTTGATTTGGAAATTTAATGCAGTTACTGATGTTACTGTTTTTGAGAATTCAAATTTGTTGAATGAGGCTTCTATTGGTTTCTTTATGTTGAGGGAAGGTAAAGTTAATAGTATTGGTAGGTTTGAAAGTGCTAATAACTTCTTCTCTGGATTGTGTCATGCTCATTCCTTGACTCTTAATAGCCAAACTATTGAGATTCTATCAAAGTATAAATTTTTTATTCAGCCATTTTACAATCTTAAATCATTAGAGCTACATACAAGTTTGAACAAAAGTAATGTTCAAGCATTAGCATGCCTATTCAGGAGCTGTCCAACCCTCCACACATTTATTCTGGAGATCATTAACGATTTCAAGATTGAAAGAAAACAATGGAACAGGGACTTATGGGACATGAATAGCACAGAGGAAGAACAGTATTGGGAATCTCAGATCCTAGGTTTGAATTCTTTCCTACAACACTTGAAAGTGGTGAAAATTCAAGGCTTTCTTGATTGTGCAAATGAAGTTACATTAGTTAAGTTTCTTCTCAAGCATGGAAAGGGTTTGGAAGAAATGATATTGTGCACAGGACATTCAAAGAGAAGAGATACTCTAAAGAGACAAAAGATAAGGTCACAACTGATGGGATTTTCTTGGGCTTCTTCTAATGCCAAATTGGAATTTAAGTAG 1545 0.3385 METRSAKRKKIAQIEKQNNAKSKQLTDRISDLPDDIIHHILLLLPIKCVAQMSVLSKRWKFLWTTFPHLDFTTLDPFPLISTKNHKIISRHPLSSSKHDFITQVLSIRDVKHKDIRVLCFRASLSFSRLNNLVRNAIRHNVRELDIEVHTEVDTDDFFNFPRCVISSESLRVLKLKSGFRLPPSSVMRNGFQSLHTLSLSLIILYNQPSLSDLFCESSFPLLRNLHLDMCFGLTHLRIGCRALEDLNLERCYELQGLEVCGAKIKRMRVISCFDAYCDKTWVRLNVPNLESLIWKFNAVTDVTVFENSNLLNEASIGFFMLREGKVNSIGRFESANNFFSGLCHAHSLTLNSQTIEILSKYKFFIQPFYNLKSLELHTSLNKSNVQALACLFRSCPTLHTFILEIINDFKIERKQWNRDLWDMNSTEEEQYWESQILGLNSFLQHLKVVKIQGFLDCANEVTLVKFLLKHGKGLEEMILCTGHSKRRDTLKRQKIRSQLMGFSWASSNAKLEFK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1598 514 Pfam F-box domain 29 64 IPR001810 GO:0005515
Mal7g1598 514 SUPERFAMILY F-box domain 27 104 IPR036047 GO:0005515
Mal7g1598 514 PANTHER F-BOX PROTEIN-LIKE 21 459 - -
Mal7g1598 514 ProSiteProfiles F-box domain profile. 26 74 IPR001810 GO:0005515
Mal7g1598 514 Pfam FBD 442 479 IPR006566 -
Mal7g1598 514 SMART 9598neu4hmm 440 514 IPR006566 -
Mal7g1598 514 Gene3D Ribonuclease Inhibitor 48 315 IPR032675 -
Mal7g1598 514 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 21 459 - -
Mal7g1598 514 SUPERFAMILY RNI-like 137 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1598 Mal-Chr7 52486003 52488089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1598 27 404 EF-hand Containing Proteins AT5G41840 24.641 1.36e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1598 - - ahf:114927451 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1598 7 52486003 52488089 Mal7g1598 7 52486003 52488089 ECH