Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1589 ATGGCTAGCAATGATAAATCAAATGGTTTTGAAGACTTGTTACCAGTGATGGCCAACAAGCTAGGTGGTGAAGGTCTAATAAAAGAGCTATGCAATGGGTTTGAATTGTTGATGGATAAAGAAAAAGGTGTGATAACATTGGATAGTTTGAGGAAAAACGCTGCTGTTTTGGGTCTTCAAGATATGAAGGAAGATGAACTTGTTAGCATGATGAAAGAAGGTGATTTAGATAGAGATGGAGCACTTACTCAGATGGAGTTTTGTGTTTTGATGTTTAGGTTGAGTCCTGAATTGATGGAAGAATCTTGGTTTTGGCTTGAGGAAGCTATGCAACATGAAATTGACAACAACAACAACAACAATAATTGTTCCTTGTAG 378 0.3704 MASNDKSNGFEDLLPVMANKLGGEGLIKELCNGFELLMDKEKGVITLDSLRKNAAVLGLQDMKEDELVSMMKEGDLDRDGALTQMEFCVLMFRLSPELMEESWFWLEEAMQHEIDNNNNNNNCSL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1589 125 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Mal7g1589 125 SUPERFAMILY EF-hand 3 91 IPR011992 -
Mal7g1589 125 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Mal7g1589 125 Gene3D - 8 123 - -
Mal7g1589 125 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Mal7g1589 125 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 119 - -
Mal7g1589 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 119 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1589 Mal-Chr7 52283705 52284082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1589 10 114 EF-hand Containing Proteins AT5G54490 65.094 2.55e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1589 K24345 - gmx:100527206 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1589 7 52283705 52284082 Mal7g1589 7 52283705 52284082 ECH