Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1587 ATGTTTAAATTCTCCTGTTTTCATGTTAATGTCCAAGGCAACAAGACAAAGAAAATAGCTCAACCTTCAACTGAAGCAATGGCAAAAGCTTTGAGAGATAGTTCCAAAAGTCCAGTCAGTAAAGATTCGTCTAACCGTTCGAGCGTGCATTCATCACTTCTAAAAGAACATTCAAATAAGCTAATGAATGTCTCGGAGAATGATATTCTCGACCAGGATTCAGTTGATCGCATTGGTAGGTTAGAGAATCTGAATAGTAAGTTTTGCATTGAAATTGACAGAGAAGTTCGCCAAACTGGGCGTCTTAGGAAGAGTCAGTCGGAAAGCGGGCTTTACCAAGGCATAACTGAGGGTGATCAAGATCATCTTGGGTTTCCCAAAAGCCGTGATGACTCACCAAATTCAATTGGCAGCCCTAATGATCAATGCAAGACGGATTCAAACTTCGGGTTTCAAGTTATTCCTGGTCCTGGCATTGATGGGTCACTTTTTTTAATCGGAGATCGGACACCTTCGGATAAAGATGCTCATGAAAATTCTGATACTCCTTTATCAGGCGATCTTGCTGGTGACTCTGCTGACCAGACTTCTGGTCCTAGTACGCCAACTTTAAAGAAGTCACGATCGTTACCAAATATCAAAGCTTCTGCGCTTTCTTCGAGAAATAATCATGCTTTTAAACATGCATCTTCAATGTCAAGATCTTCTGATGATCTTTGTGCTTTAGGCTTGAGGAAGAAAGAGGTGTTCATCAATGCCAATTATGATCAAATAGGGGAAACTCAAGAAAGAGAAAGTGGCATGGAAAAAACTGAAGATAATGGCATGGACAAATACTTTGCTGATGGTTTTGATTCTCATCTGCTTTCCGGCTTACCAAAAGAGTTGATAATGCCAATTACAGACGATATAAGTGTTGTCGAACCCCTTCAAGGAGATTCATCGATTGAATTTCATAACAAGGATTTTAAGCTTAAGAGGATTGAGGATTGGGTGATCGGTCTGCAGCATTGTGGACCTCCTCTAGAGGATATAACTGAATTGCCCGAATCTGTTGATCCTATAGTTGATGTTAACACCGCAAATGCCGTGACTGCTTCAGTTGTGGATCATAAGATCACTCCAGGAATGGAAACAGCTAAAAGATATATATCTTCTTTGACTGCCAATGCCACTGCAGCACAGCTGGCAAATCACGGGTTGGCTGTGATCCCATTTTTGAGTGCATTTGTGAGTTTGAAGGTGCTCAATTTGTCTGGAAACGCAATTGTAAGGATAACTGCTGGTACTCTTCCTCGAGGACTTCACACATTAAATCTGTCAAAAAACAATATCTCCACTATAGAGGGATTACGTGAACTTACTCGGCTTCGTGTCCTAGATCTCAGCTACAACCGTATACTAAGAATTGGACACGGTCTGGCGTCCTGTTCTTCTCTAAAGGAGCTGTACCTGGCTGGAAACAAGATTGGTGAAGTCGAGGGTCTGCACCGCCTATTGAAACTAAGTATCCTGGATCTCCGTTTTAACAAGATTTCAACTGCCAAATGTCTTGGACAACTTGCAGCCAACTATAATTCTTTGCTAGCCATCAACTTGGAAGGTAACCCTTGCCAGAAAAATGTTGGAGATGAACAAATTAAGAAATATCTGCAAGGGCTTCTTCCCCATCTTGTCTACTACAATAGGCAGCCATTCAAAGCGAACAGTTTGAAGGACGGTGCAGATCGTGCAGTTCGATTAGGAATGAATTCACAACAGTTTGATCGCAGTCTTAGAGTGGATCGCAAGTCTACAAGGAAGGGGCCATCATCTGTGCGGAGGCCATCATCTGCTTCCTCACCGAAACTCTCAAAAGGAAAGCAAGCCCAGCTCCCACCAATCAGAACCAAAACATCAACCCAAAGTCGCCATCATTTTGATTCTCCCAGCAAAGTATTGAGCTTGAATTCAGGGCAGCTCATGCGCAAGAGTCGCAGCGAAGGAACTCTTCTTGGAGCTTTGTAA 2007 0.425 MFKFSCFHVNVQGNKTKKIAQPSTEAMAKALRDSSKSPVSKDSSNRSSVHSSLLKEHSNKLMNVSENDILDQDSVDRIGRLENLNSKFCIEIDREVRQTGRLRKSQSESGLYQGITEGDQDHLGFPKSRDDSPNSIGSPNDQCKTDSNFGFQVIPGPGIDGSLFLIGDRTPSDKDAHENSDTPLSGDLAGDSADQTSGPSTPTLKKSRSLPNIKASALSSRNNHAFKHASSMSRSSDDLCALGLRKKEVFINANYDQIGETQERESGMEKTEDNGMDKYFADGFDSHLLSGLPKELIMPITDDISVVEPLQGDSSIEFHNKDFKLKRIEDWVIGLQHCGPPLEDITELPESVDPIVDVNTANAVTASVVDHKITPGMETAKRYISSLTANATAAQLANHGLAVIPFLSAFVSLKVLNLSGNAIVRITAGTLPRGLHTLNLSKNNISTIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDLRFNKISTAKCLGQLAANYNSLLAINLEGNPCQKNVGDEQIKKYLQGLLPHLVYYNRQPFKANSLKDGADRAVRLGMNSQQFDRSLRVDRKSTRKGPSSVRRPSSASSPKLSKGKQAQLPPIRTKTSTQSRHHFDSPSKVLSLNSGQLMRKSRSEGTLLGAL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1587 668 MobiDBLite consensus disorder prediction 589 668 - -
Mal7g1587 668 MobiDBLite consensus disorder prediction 185 211 - -
Mal7g1587 668 ProSiteProfiles Leucine-rich repeat profile. 434 455 IPR001611 GO:0005515
Mal7g1587 668 MobiDBLite consensus disorder prediction 131 149 - -
Mal7g1587 668 PANTHER BNAA09G01440D PROTEIN 150 664 - -
Mal7g1587 668 SUPERFAMILY Outer arm dynein light chain 1 404 564 - -
Mal7g1587 668 PANTHER NISCHARIN RELATED 150 664 - -
Mal7g1587 668 Pfam Leucine Rich repeat 476 491 IPR001611 GO:0005515
Mal7g1587 668 MobiDBLite consensus disorder prediction 37 54 - -
Mal7g1587 668 Gene3D Ribonuclease Inhibitor 360 551 IPR032675 -
Mal7g1587 668 SMART LRR_sd22_2 454 476 - -
Mal7g1587 668 SMART LRR_sd22_2 499 523 - -
Mal7g1587 668 SMART LRR_sd22_2 477 498 - -
Mal7g1587 668 SMART LRR_sd22_2 432 453 - -
Mal7g1587 668 MobiDBLite consensus disorder prediction 100 211 - -
Mal7g1587 668 ProSiteProfiles Leucine-rich repeat profile. 456 478 IPR001611 GO:0005515
Mal7g1587 668 SMART LRR_typ_2 499 521 IPR003591 -
Mal7g1587 668 SMART LRR_typ_2 410 433 IPR003591 -
Mal7g1587 668 SMART LRR_typ_2 454 477 IPR003591 -
Mal7g1587 668 MobiDBLite consensus disorder prediction 27 54 - -
Mal7g1587 668 MobiDBLite consensus disorder prediction 604 658 - -
Mal7g1587 668 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Mal7g1587 668 ProSiteProfiles Leucine-rich repeat profile. 479 500 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1587 Mal-Chr7 52185183 52187547 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1587 - - gmx:100790061 825.469