Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1283 ATGGCGTGTATCAAAGGGGTTAATCGATCGGCGTCAGTGGCGCTGACGCCGGATGCACCGTATCTCGCCGCTGGAACCATGGCCGGCGCCGTCGATCTATCGTTTAGCTCATCGGCGAATCTTGAAATTTTCAAGCTAGATTTCCAATCCGATGATGCTGAATTGCCTCTTGTTGCGGAGTACCCTAGCTCTGATCGATTCAATCGGCTTTCTTGGGGGAGAAACGGTTCTTCGTCTGAAGGTTTCGCTCTTGGTCTTGTTGCTGGTGGATTAGTCGATGGGAATATTGATCTCTGGAATCCTCTTACTCTGATCCGCTCGGAGGAAAATGAAAGTTCTCTCGTTGGACATCTTGTAAGGCATAAAGGACCGGTTCGTGGTCTCGAGTTTAATTCAATTGCACCTAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGCTAATCCTTCAGAGCCTACACATTTTCCACCATTAAAGGGCAATGGCTCTGCTTCTCAGGGGGAAGTTTCATTCTTATCTTGGAATAGTAAAGTGCAACACATATTAGCGTCCACTTCATATAATGGGACCACTGTGGTCTGGGACCTAAAGAAACAAAAGCCAGTGATAAGCTTTGCAGATTCAGTTAGACGGCGGTGCTCAGCTTTGCAGTGGAATCCTGATGTTGCTACCCAACTTGTTGTTGCATCAGATGAAGACGGATCTCCTGCTATAAGGCTTTGGGATATGAGGAATACAATGACACCAATAAAGGAGTTTGTGGGGCACACTAGAGGAGTAATTGCAATGTCATGGTGTCCCAATGATAGCTCTTATTTGCTTACCTGTGGAAAAGATAGCCGGACCATATGCTGGGACACTATTTCTGGAGAGATTGCCTATGAATTGCCAGCTGGAACCAATTGGAACTTTGATGTGCATTGGTATTCTAAGATACCTGGAGTAATATCAGCATCTTCCTTTGATGGAAAAATTGGCATATACAATATTAAGGGTTGCCGTCAATCTGGAGATAGTGATTATGGTGCAGTACCGCTGAGAGCTCCAAAATGGTATAGACGTCCTGCTGGTGCGTCTTTTGGCTTTGGAGGTAAACTTGTGTCATTTCATCCCGGTGCGCCTGCTTCAGGTTCTCCTGCTGGGGCTTCAGAGGTTTATGTGCATAACATGGTCACCGAAGACGGTCTGGTGAGTCGTTCATCTGAATTTGAAGCTGCGATACAAAATGGGGAAAAACCTTTATTAAGGGTTCTATGTGATAAAAAGTCTCAGGAATCAGCATCTGAGGAGGAAAGGGAAACATGGGGCTTTTTGAAGGTTATGTTTGAAGAAGATGGAACTGCAAGAACAAAACTTCTCACACACCTTGGTTTTGATGTACCTAGTGAAGAAAAAGACACAGTTAATGATGATCTTTCCCAGGAAGTAAATGCTCTTGGACTTGAGGACACATCTTTTAATAACATAGGACATGTGGCTACTATTGAAGCCAATAATTTCTCTTATGACAACGGGGAGGATTTCTTTAACAATCTTCCCAGTCCTAAAGCTGATACTCCTCCATCTACGGCTGCTAGCAACTTTGTTGTTGCGGATAATGCAAATGGTTCAGACAAAATTGAAGATGATGTGGAAGTGGAAGTGAGCAGCGATCCTTCATTTGATGACAGTGTGCAGCGTGCTTTAGTTGTTGGGGACTACAAGGGGGCAGTTTCTCAATGCATATCTGCTAATAAATGGGCTGATGCTTTAGTTATTGCTCATGTGGGTAGTACCTCCTTGTGGGAAAGTACACGGGATCAATACCTTAAGAAGAACCGATCACCATACTTAAAGGTTGTATCAGCGATGGTGAGCAATGATCTCTTGAGCCTTGTGAACACTAGGCCTCTAAAATTCTGGAAAGAAACCCTTGCTCTTCTTTGCAGTTTTGCTCAGAGAGATGAATGGACTATGCTTTGCGACACACTTGCTTCAAAACTCATGGGGGCTGGAAATACATTAGCTGCAACTCTTTGTTATATATGTGCTGGAAATATTGATAAAACTGTTGAAATTTGGTCAAGGAGCCTGTCGGATGAGTATGAGGGGAAATCTTATGTTGACCTTCTTCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGGTTTAGTGCCTCTCTGTGCAAGCTTGTTGAGAAATATGCTGAAATTTTAGCAAGTCAAGGGTTGCTGACCACAGCAATGGAGTATCTAAAACTTTTAGGTTCTGAAGAACTTTCAACTGAACTTGTGATTTTGAAGGACCGAATTGCACTGTCTACAGAACCTGTTGCAGAGAAAGACTTAAAGACCACTGCTTTTGAAAATTCTCAATCCAATTATAATATGAATTATTACCAGGGTTCAGTATCCCCTCAAGTGCAGCATGGTGTTTCTGGACCTCAATATCCTGAAAGCTATCCACAGCCATTTGATCCTAGATATGTTAGTCATGGTGTACCTACTGCACACCAGCAACCCCAACAACAACCCCATATCTTTGTTCCGTCACAGGCTACTCAGGCTCCCCAAGCTCCACAGGCGAACTTCCCAACTACTGGGCGACAACCTCCTGTGATGACTTTTGAACCTCAAACTCCTCATCTGCTTCCTAACGTGGACCAATATCAGCAGCCTACATTGGGTTCTCAATTGTATAATACAAACAACAATCCACCTTTCCCGCCTACCAATCCACCTTACCAGCCTACACCTCCTGCTCCATCTCAAATAAACATGGGTCATGGCCAGAACTTACCAAACATTGTGGCACCTACCTCGAATCCAGTTGGATTCATGCCAGTCCATAGTTCGGCTGGCGTTCAAAGACCTGTGGTGGGATCAATTCAACCTCCCAGTCCCCCTCAACCGCAACCTGTGCAACCGGCTGCTACACCAGCAGCTCCACCACCTACTGTGCAGACTGCTGATACTTCAAAAGTACCTGCACAACAAATGCCTATTGTCACAACATTGACAAGACTTTTCAACGAGTCATCGGAAGCACTGGGAGGTTCACGTGCAAACCCAACAAAGAAGCGGGAGATAGAAGACAACTCAAAGAAAATTGGGGGGCTGTTTGCAAAGTTGAACAGTGGTGACATCTCCAAAAATGCTTCTGATAAGCTCCTTCAGCTATGTCAGGCGTTAGACAATGGTGATTTTGTTACTGCCCTTCAAATTCAGGTTCTTCTGACTACTACTGAATGGGATGAATGCCAGTCCTGGTTAGGTCCACTGAAGCGAATGATCAAGACAAGGCAGAGTGTGAGATTAAGTTAA 3339 0.445 MACIKGVNRSASVALTPDAPYLAAGTMAGAVDLSFSSSANLEIFKLDFQSDDAELPLVAEYPSSDRFNRLSWGRNGSSSEGFALGLVAGGLVDGNIDLWNPLTLIRSEENESSLVGHLVRHKGPVRGLEFNSIAPNLLASGAEDGEICIWDLANPSEPTHFPPLKGNGSASQGEVSFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRCSALQWNPDVATQLVVASDEDGSPAIRLWDMRNTMTPIKEFVGHTRGVIAMSWCPNDSSYLLTCGKDSRTICWDTISGEIAYELPAGTNWNFDVHWYSKIPGVISASSFDGKIGIYNIKGCRQSGDSDYGAVPLRAPKWYRRPAGASFGFGGKLVSFHPGAPASGSPAGASEVYVHNMVTEDGLVSRSSEFEAAIQNGEKPLLRVLCDKKSQESASEEERETWGFLKVMFEEDGTARTKLLTHLGFDVPSEEKDTVNDDLSQEVNALGLEDTSFNNIGHVATIEANNFSYDNGEDFFNNLPSPKADTPPSTAASNFVVADNANGSDKIEDDVEVEVSSDPSFDDSVQRALVVGDYKGAVSQCISANKWADALVIAHVGSTSLWESTRDQYLKKNRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMGAGNTLAATLCYICAGNIDKTVEIWSRSLSDEYEGKSYVDLLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELSTELVILKDRIALSTEPVAEKDLKTTAFENSQSNYNMNYYQGSVSPQVQHGVSGPQYPESYPQPFDPRYVSHGVPTAHQQPQQQPHIFVPSQATQAPQAPQANFPTTGRQPPVMTFEPQTPHLLPNVDQYQQPTLGSQLYNTNNNPPFPPTNPPYQPTPPAPSQINMGHGQNLPNIVAPTSNPVGFMPVHSSAGVQRPVVGSIQPPSPPQPQPVQPAATPAAPPPTVQTADTSKVPAQQMPIVTTLTRLFNESSEALGGSRANPTKKREIEDNSKKIGGLFAKLNSGDISKNASDKLLQLCQALDNGDFVTALQIQVLLTTTEWDECQSWLGPLKRMIKTRQSVRLS* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1283 1112 Pfam WD domain, G-beta repeat 114 151 IPR001680 GO:0005515
Mal7g1283 1112 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Mal7g1283 1112 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Mal7g1283 1112 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Mal7g1283 1112 MobiDBLite consensus disorder prediction 963 999 - -
Mal7g1283 1112 Gene3D - 351 780 - -
Mal7g1283 1112 PRINTS Proline rich extensin signature 824 840 - -
Mal7g1283 1112 PRINTS Proline rich extensin signature 914 931 - -
Mal7g1283 1112 PRINTS Proline rich extensin signature 865 886 - -
Mal7g1283 1112 PRINTS Proline rich extensin signature 969 994 - -
Mal7g1283 1112 MobiDBLite consensus disorder prediction 967 988 - -
Mal7g1283 1112 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN, ANCESTRAL COATOMER ELEMENT 1, SEC16/SEC31-RELATED 2 1110 - -
Mal7g1283 1112 Gene3D - 1 337 IPR015943 GO:0005515
Mal7g1283 1112 Pfam Sec23-binding domain of Sec16 564 760 IPR024298 -
Mal7g1283 1112 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Mal7g1283 1112 Gene3D Functional domain of the splicing factor Prp18 997 1111 - -
Mal7g1283 1112 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 295 335 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 54 100 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 161 201 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 252 292 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 111 151 IPR001680 GO:0005515
Mal7g1283 1112 SMART WD40_4 204 248 IPR001680 GO:0005515
Mal7g1283 1112 PANTHER SEC31-RELATED PROTEIN 2 1110 IPR040251 GO:0006888
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1283 118 313 Miscellaneous Gene Families AT5G08390 24.242 1.18e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1283 K14005 - gmx:100788642 1819.67