Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1041 ATGAAAGAAAGTAACGGTAAGAACACTATCGAAAAACCAGATCAAGATCAAAATCAAAATCAAGATCTAGGTTTCCATTTCTTGGAATTGAGTCGTAGAAAACCGAAACAAGATTCCGAAGATTTTGAAGTTGATGATGAAGAGAAAGAGGAATTACCGAGTGAGTTGAATACTATAAATTCTTCAGGAGGTTTTGTTGTTGTTGCTACGGATAAGCTTTCAGTGAAGTATACAAGTGTGAATCTTCATGGTCATGATGTTGGTGTTATTCAAGCGAATAAAGTTGCACCGATGAAGAGGATTGTGTATTATTTTGAGATTTTTGTTAAGGATGCTGGGGTTAAAGGGCAAGTTTCGATTGGGTTTACGACGGAGAGTTTTAAGATGCGGAGACAACCTGGGTGGGAGGCTAATAGCTGTGGATATCATGGGGATGATGGTTTCCTTTATCGTGGAAATGGCAAAGGGGAAGCTTTTGGTCCAACCTATACCACTGGTGATATAGTTGGTGCTGGAATTAACTATGCTGCTCAGGAATTCTTTTTCACTAAAAATGGACAAGTTGTTGGCACAGTTTACAAAGAAATGAAGGGTCCTCTTTTCCCAACTGTTGCTGTTCATAGCCAGAATGAAGAGGTACACGTCAACTTCGGCCGGAAACCATTCACCTTTGACCTAAAGGAATTTGAAGCACAAGAAAGAATGAAGCTGCAAGTGAAAATAGAGGAAATTCCAGTGCCACCAAATGCCAGTTATGGAATTGTCCGTTCCTACCTGCTACACTATGGCTATGAAGATACATTGAATTCATTTGATGAGGCTAGTAGAAGTACCATTCCTCCTATAAATATAGTGCAAGAAAATGGTATTGATGACCAGGAAACAACATATGCATTGAATCACAGAAAGACTCTACGGCAGCTAATCAGTGATGGGGAGATTGATGCTGCGTTTGGTAAATTGCGTGAATGGTATCCCCAGATTGCTGAGGACAGTACATCAGCTATGTGTTTTCTGCTTCATTGCCAAAAATTTATCGAACTAGTTCGGGTTGGAGCACTGGAGGAGGCTGTCAAATATGGAAGAATAGAATTGTCAAGTTTTTTTGGGTTGTCTCTCTTTGAGGATTTAGTTCAGGACTGTGTTGCTTTGCTGGCCTATGAACGACCATTGGAATCTGCCGTAGGTTATCTTCTGAAAGACTCACAGCGCGAAGTTGTAGCCGATACAGTAAATGCAATGATATTGTCTACAAATCCCAACATAAAAGAAACGAAAAAGTGCTTGCACTCAAATCTTGAGAAGTTACTAAGGCAGCTCACTGCATGTTGTTTAGAGAGACGATTGTTGAGTGGAGAGCAAGGAGAAGCTTTTCAACTTCAAAGAGTGCTTAGCAGTGGTAGAAGAAGCTAG 1413 0.4041 MKESNGKNTIEKPDQDQNQNQDLGFHFLELSRRKPKQDSEDFEVDDEEKEELPSELNTINSSGGFVVVATDKLSVKYTSVNLHGHDVGVIQANKVAPMKRIVYYFEIFVKDAGVKGQVSIGFTTESFKMRRQPGWEANSCGYHGDDGFLYRGNGKGEAFGPTYTTGDIVGAGINYAAQEFFFTKNGQVVGTVYKEMKGPLFPTVAVHSQNEEVHVNFGRKPFTFDLKEFEAQERMKLQVKIEEIPVPPNASYGIVRSYLLHYGYEDTLNSFDEASRSTIPPINIVQENGIDDQETTYALNHRKTLRQLISDGEIDAAFGKLREWYPQIAEDSTSAMCFLLHCQKFIELVRVGALEEAVKYGRIELSSFFGLSLFEDLVQDCVALLAYERPLESAVGYLLKDSQREVVADTVNAMILSTNPNIKETKKCLHSNLEKLLRQLTACCLERRLLSGEQGEAFQLQRVLSSGRRS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1041 470 ProSiteProfiles LIS1 homology (LisH) motif profile. 247 279 IPR006594 GO:0005515
Mal7g1041 470 Pfam SPRY domain 103 219 IPR003877 GO:0005515
Mal7g1041 470 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 298 356 IPR006595 -
Mal7g1041 470 PANTHER RAN-BINDING PROTEIN M HOMOLOG 40 467 - -
Mal7g1041 470 CDD SPRY_RanBP_like 88 218 IPR044736 -
Mal7g1041 470 ProSiteProfiles B30.2/SPRY domain profile. 34 222 IPR001870 -
Mal7g1041 470 SMART ctlh 298 356 IPR006595 -
Mal7g1041 470 MobiDBLite consensus disorder prediction 11 25 - -
Mal7g1041 470 Pfam CTLH/CRA C-terminal to LisH motif domain 300 443 IPR024964 -
Mal7g1041 470 Gene3D - 33 238 IPR043136 -
Mal7g1041 470 MobiDBLite consensus disorder prediction 1 54 - -
Mal7g1041 470 SMART SPRY_3 100 221 IPR003877 GO:0005515
Mal7g1041 470 PANTHER RAN BINDING PROTEIN 9-RELATED 40 467 - -
Mal7g1041 470 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 224 IPR013320 -
Mal7g1041 470 SMART toby_final6 352 453 IPR013144 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1041 K23334 - gmx:100805319 758.829