Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0790 ATGGTTATTTTGTTTGTTAACAAGTTCAGATATAGATATAGATATAGATATGATTCTGGTTTGATTCCAACACCCCGAAATTTAGGTATCTTAATTTCAATTTTCCATACTAGTTCATTGTCACCAATTACGAAACCCATTAATTGGAACACTACTCACAGTTTTGTTAGGGAAAACCCTCTCCTTTCTATCTTAGAAAGATGCAAAACCCTTGTCCAGTTGAAGCAAATTCAAGCCCAAATGATCTTGACGGGTTTGATCGAAAATGGGTTTGCTGCGAGTCGTCTTGTTGCGTTCTGCGCTTTATCAGAGTCAAAAGCACTTGATTATTGTACTAAAATATTGTATCGAATTAAAGAACCGAATGTGTTTTCTTGGAATGCGACAATTAGGGGGTATGTGGAGAGTGGAGATGTAGAAGGGAGTTTTATGTTGTATAAGAGAATGTTGCAAGGTGGTGTGTTGAAGCCGGATAATCATACTTACCCGTTGTTGCTTAAAGGTTGTTCTTGTCAATCTTTAAAGTGTGTTGGTCTTGGTATACTTGGACATGTATTGAAGTTTGGTTTTGGATTTGATGTATTTGTTCACAATGCGTCGATCACTATGCTACTCTCGTACGGGGAGTTGGGAGCAGCGTATGATTTATTTATTGAAAGTCGTGTGAGAGACTTGGTAACCTGGAATTCGATGATTACTGGATGTGTTAAAAGGGGACTGGCGAATGAGGCTTTAAAAATCTATCGGCAGATGGAGGCAGAGAGAGTGAAACCGAATGAGATTACAATGATTGGGATGGTTTCTTCTTGTTCTCAGTTGCAGGATTTAAATCTTGGCAGAGAATTTCATCGTTACATCGAAGAACACGGCCTTGAGTTGACCATTCCGCTCACTAATGCACTTATGGACATGTATGTGAAGTGTGGGGAGCTGTTGGCTGCACGGGTTTTATTTGATAACATGGCACAAAAGACCCTTGTTTCATGGACTACAATGGTTTTGGGATATGCCAGATTCGGTTTTCTGGATGTTGCCCGGGAGATTTTATATAAAATTCCAGAGAAGAGTGTTGTGCCGTGGAATGCCATCATCAGTGGCTGTGTCCAGGCGAAGCATAGTAAAGAGGCATTGACTCTATTCAATGAAATGCAAATTAGTAAAGTAGAGCCTGATAAAGTGACCATGGTTAACTGTTTGTCAGCATGCTCACAACTAGGAGCACTTGATGTTGGAATATGGATTCACCGGTATATTGAAAGACACAATCTTTCTATTGATGTCGCCTTAGGAACTGCACTAGTCGACATGTATGCCAAGTGTGGAAATATTGCAAGGGCACTCCAGGTTTTTGAAGAGATTCCTCAAAGAAATTGTTTGACCTGGACAGCCATCATTTGTGGTTTAGCACTTCATGGGAATGCTCAGGATGCTATATCCTATTTCTCAAAAATGATTCATATTGGAATAGTGCCTGATGAGATCACCTTTCTTGGTGTGTTATCAGCTTGTTGTCATGGAGGTTTAGTTGAAGAAGGCCGCAAATACTTTTCCGAAATGAGCTCTAAATTTAATGTATCCCCTAAGCTTAAACACTACTCATGCATGGTGGATCTCTTAGGAAGGGCGGGTCATTTGGAGGAAGCAGAAGAACTCGTTAAAAATATGCCCATGGCAGCAGATGCTGCTGTTTTAGGTGCTTTATTCTTTGCTTGCCGTATTTATGGCAATGTTCAAATTGGTGAGAGGACGGCTTTTAAGCTTCTTGAGATTGATCCTCAAGATAGTGGAAACTATGTTCTGCTTGCTAGCATGTACAGTGAGGCAAAAATGTGGAAGGAAGCAAGGAGTGCAAGGAAACTAATGAATGATAAAGGAGTAGAGAAGACTCCTGGTTGCAGTTCGGTTGAGATCAATGGCATTGTGCACGAGTTCGTGGTGAGGGATGTATCACATCCACAGTCTGAATGGATTTATGAATGTCTGGTTACGCTGACAAAACAACTGGAGCTTCTCGAATTGACATGA 2025 0.4064 MVILFVNKFRYRYRYRYDSGLIPTPRNLGILISIFHTSSLSPITKPINWNTTHSFVRENPLLSILERCKTLVQLKQIQAQMILTGLIENGFAASRLVAFCALSESKALDYCTKILYRIKEPNVFSWNATIRGYVESGDVEGSFMLYKRMLQGGVLKPDNHTYPLLLKGCSCQSLKCVGLGILGHVLKFGFGFDVFVHNASITMLLSYGELGAAYDLFIESRVRDLVTWNSMITGCVKRGLANEALKIYRQMEAERVKPNEITMIGMVSSCSQLQDLNLGREFHRYIEEHGLELTIPLTNALMDMYVKCGELLAARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKHSKEALTLFNEMQISKVEPDKVTMVNCLSACSQLGALDVGIWIHRYIERHNLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAIICGLALHGNAQDAISYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRIYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSSVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLELLELT* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0790 674 Gene3D Tetratricopeptide repeat domain 361 497 IPR011990 GO:0005515
Mal7g0790 674 Gene3D Tetratricopeptide repeat domain 499 650 IPR011990 GO:0005515
Mal7g0790 674 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 46 670 - -
Mal7g0790 674 Pfam E+ motif 641 667 IPR046849 -
Mal7g0790 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Mal7g0790 674 Pfam E motif 574 636 IPR046848 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 124 155 IPR002885 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 226 260 IPR002885 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 460 493 IPR002885 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 495 527 IPR002885 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 360 391 IPR002885 -
Mal7g0790 674 TIGRFAM PPR: pentatricopeptide repeat domain 532 555 IPR002885 -
Mal7g0790 674 Pfam PPR repeat 531 555 IPR002885 -
Mal7g0790 674 Pfam PPR repeat 460 489 IPR002885 -
Mal7g0790 674 Pfam PPR repeat 495 521 IPR002885 -
Mal7g0790 674 Pfam PPR repeat 431 458 IPR002885 -
Mal7g0790 674 Pfam PPR repeat 299 323 IPR002885 -
Mal7g0790 674 Pfam PPR repeat family 224 270 IPR002885 -
Mal7g0790 674 Pfam PPR repeat family 121 169 IPR002885 -
Mal7g0790 674 Pfam PPR repeat family 355 402 IPR002885 -
Mal7g0790 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 224 258 IPR002885 -
Mal7g0790 674 Gene3D Tetratricopeptide repeat domain 179 277 IPR011990 GO:0005515
Mal7g0790 674 Gene3D Tetratricopeptide repeat domain 51 176 IPR011990 GO:0005515
Mal7g0790 674 PANTHER OS10G0400250 PROTEIN 46 670 - -
Mal7g0790 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 122 156 IPR002885 -
Mal7g0790 674 Gene3D Tetratricopeptide repeat domain 278 359 IPR011990 GO:0005515
Mal7g0790 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 492 522 IPR002885 -
Mal7g0790 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0790 Mal-Chr7 20432548 20434572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0790 79 669 Glycoside Hydrolase AT3G49170 27.787 9.94e-81 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0790 - - mtr:MTR_4g024860 1205.28