Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0184 ATGGAGAATAATACTAAGAAAGAAGAACAAAACCCTAATTTTTCAGCATTCCCTTTCAAACCCTATTCTATCCAAATCGATTTCATGAATGCTCTCTATCAATCTCTCAACCATGGTGGCATCTCCATGTTAGAAAGCCCAACCGGTACTGGGAAAACTATGAGTGTAATTTGTAGTGCATTGCAATGGGTACTCGATCAGCGGCGACGAGTAGAAGAAGAAAATGCTTCTGGGTCTGTGAGTGGGAAGAATCAAGGTTCAGATGATGAACCTGATTGGATGAGAGATTTTGTTGTCAACAATGATGAAAAGCAATTCAAAGAGGAAAAAAAGAAGAATAAAAAGGAAAAATTTAGGTCTGTGTTAGGAAAATCTGATAATGATTATGATTATGGAAAAAGTAAAAAAAATGGTAATTTGAAGAAGAAAATTGATGAAATGGGTGATAATGACAATGAGTTTTTACTTGAAGAGTATGAGAGTGAAGATGAGAACGGTGAGGGGAGTAGTGTAGCTTCGAAGAGGAAAGCGAGTAAAAGTAGTTTTAGTTCTTCGAGTGAAGATGAGTCTGGCGATGATGAGGAGGAGGAAGAGGAGAAAAAGTTGAAGGTTTATTTTTGTAGTAGGACACATTCACAGCTTTCGCAGTTCGTAAAAGAGTTGAGGAAGACAGTGTTTGCTGATGAGATGGGTGTTGTGAGTTTAGGTTCCAGGAAAAATCTTTGTATTAATCAAGAGGTACTTGCACTTGGAAACTCGTCTCGCATAAATGAGAGATGCTTGGAACTCCAAAAGAAAAAGAAAAATGATGCTACAAAAGTTAAGAACTTAAAAGTAGGTACAGGAGCACGCAGAACAAAGGCTTCCTCTGGTTGCCCAATGCTTAGAAAACGTAGACTACAACAAGAATTCAGGAATGAGGTATCTCAACAAGGGCCTTTGGATATTGAAGATCTTGCTAACCTTGGAAGAACTATGGAAACTTGTCCATATTATGGCTCTAGAAGCATGGTTCGGAGAGTTGATCTCGTGGTCCTACCATATCAATCTCTTCTTTCAAAATCTTCTCGTGAAGCACTTGGTCTGAATTTGAAATCCAACATTGTTATAATAGACGAGGCTCATAATTTGGCTGATTCACTCATCAACATGTATGACTCCAAACTTACTCTATCGCAGCTAGAGAATGTGCATCGCCATGTAGAGCGGTACTTTGTGAGATTCCGCAACCTTTTGGGACCTGCTAATAGGAGATACATTCAAACTCTGATGGTCCTCATACAAGCTTTTCTCCGAGTACTACTAAATGAGAAAGATGGAAATCTCATAGATTCATGCCGTGATATAGAAAAGGCTTCTGAAGAAAGGAGAGCCTCTGATTTTACTATGGCCATCAATGATTTTATATTTGAACTAAATATTGACAATATCAACTTGGTCAAATTGCTAAAGTACATAAAGGAAAGCAATATCATGCACAAGGTTAGTGGCTATGGAGAAAAGATGGCTACATTGGACAAGGTATCAGCACTTAATATAACAGGGGAACACGGTGAAGATGGAAGCTGTCAGTCCGCTTTCCAGGCATTAGCTGACATGTTGCTATCACTAGTTAACAAGGACAGTGATGGAAGGATAATAATTTCCAGGTCTAGTTCAACAAGCTTCAGGAAGCAAGGTCAAGGATATATTAAATATGTTATGCTCAGTGCAGAGAAGATTTTCTCCGAGATTGTAGATGAAGCGCATGCCGTCCTGTTAGTAGGGGGAACACTTCAGCCAATAGATGAGACAAGGGAGAGACTCTTTCCATGGTTACCACCAAATCAGTTGAAGTTCTTTTCTTGTGGTCATATTGTCCCTCCAGAGAGCATTATGCCAATTGCAGTTTCCCGTGGGCCCACTGGCCGCTCCTTTGATTTTAGCTACAGCTCCAGGAGCTCAGCTGTCATGATGCAAGAACTAGGTCTTTTGTTATGCAACTTGGTGACGGTGGTTCCTCAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTATGAAAGTAAAGTCTTTGAAAACTGGGAATCTTCTGGCATCCTCGAAAGGATTACAAAGAGGAAGCGTGTCTTTAGAGAGCCTAGAAACAATATGGACGTTGAATCTGTTCTCAAGGAATATAAAGATACTATTTATACCCCATCAAGTGTGAATTCAGAAGTGAACCAAGCATCTCACACTGGTGCAGTACTCCTTGCTGTTGTTGGTGCAAAGTTATCTGAAGGGATCAACTTGAGTGATGGGATGGGTCGATGCATAATCATGGTTGGTCTGCCATATGCTAGCCCATCTGACATTGAGTTATTGGAGAGGATAAAGCACATTGATGGTTTTAGAAATTCCAAGTCCCTTGAAAATCCTGCATTTTCATCTAGTTATGATGTATATGGTGGAGATATACAAGGTGGTTTTGACATATTAAGAAGTTGCAGTCACAGGGGAAAAGAGTATTACGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCGATTCGTCACATAAATGACTACGCAGCTATTTTATTGGTTGATACAAGGTATGCATCTGATTCCTCAAAAAAGAGCTTTAGCCACCCAACCACCAAACTCCCCAATTGGATAAAAGATCGCCTTGTTTCTTCTGCCAAAAACTATGGCGAGGTGCATAAGTTGCTGCATCAGTTTTTCAAACTCAAAAAGACATGTTGCCAATAG 2739 0.3976 MENNTKKEEQNPNFSAFPFKPYSIQIDFMNALYQSLNHGGISMLESPTGTGKTMSVICSALQWVLDQRRRVEEENASGSVSGKNQGSDDEPDWMRDFVVNNDEKQFKEEKKKNKKEKFRSVLGKSDNDYDYGKSKKNGNLKKKIDEMGDNDNEFLLEEYESEDENGEGSSVASKRKASKSSFSSSSEDESGDDEEEEEEKKLKVYFCSRTHSQLSQFVKELRKTVFADEMGVVSLGSRKNLCINQEVLALGNSSRINERCLELQKKKKNDATKVKNLKVGTGARRTKASSGCPMLRKRRLQQEFRNEVSQQGPLDIEDLANLGRTMETCPYYGSRSMVRRVDLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLINMYDSKLTLSQLENVHRHVERYFVRFRNLLGPANRRYIQTLMVLIQAFLRVLLNEKDGNLIDSCRDIEKASEERRASDFTMAINDFIFELNIDNINLVKLLKYIKESNIMHKVSGYGEKMATLDKVSALNITGEHGEDGSCQSAFQALADMLLSLVNKDSDGRIIISRSSSTSFRKQGQGYIKYVMLSAEKIFSEIVDEAHAVLLVGGTLQPIDETRERLFPWLPPNQLKFFSCGHIVPPESIMPIAVSRGPTGRSFDFSYSSRSSAVMMQELGLLLCNLVTVVPQGIVVFFPSFDYESKVFENWESSGILERITKRKRVFREPRNNMDVESVLKEYKDTIYTPSSVNSEVNQASHTGAVLLAVVGAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIKHIDGFRNSKSLENPAFSSSYDVYGGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKKSFSHPTTKLPNWIKDRLVSSAKNYGEVHKLLHQFFKLKKTCCQ* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0184 912 TIGRFAM rad3: DNA repair helicase (rad3) 142 787 IPR013020 GO:0003678
Mal7g0184 912 Pfam Helicase C-terminal domain 659 873 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mal7g0184 912 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 896 IPR045028 -
Mal7g0184 912 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 11 423 IPR014013 GO:0005524
Mal7g0184 912 Pfam DEAD_2 206 394 IPR010614 GO:0003677|GO:0003678|GO:0005524
Mal7g0184 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 402 IPR027417 -
Mal7g0184 912 MobiDBLite consensus disorder prediction 171 185 - -
Mal7g0184 912 Gene3D - 637 878 IPR027417 -
Mal7g0184 912 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 12 896 IPR028331 -
Mal7g0184 912 MobiDBLite consensus disorder prediction 73 94 - -
Mal7g0184 912 SMART Cxpdneu3 677 864 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mal7g0184 912 SMART deadxpd 13 417 IPR006554 GO:0003678|GO:0016818
Mal7g0184 912 MobiDBLite consensus disorder prediction 159 196 - -
Mal7g0184 912 CDD SF2_C_XPD 623 862 - -
Mal7g0184 912 Gene3D - 20 428 IPR027417 -
Mal7g0184 912 SMART ultradead3 17 456 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0184 Mal-Chr7 4200803 4211054 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0184 K11273 - gmx:106794132 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0184 7 4200803 4211054 Mal7g0184 7 4200803 4211054 ECH