Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0116 ATGCGATTAACTTCTTCTTCAATGGGATTCGGGTCGGGTTCGCTAATGTGGTTTCGAAAGGGAATTCGGATCCACGATAACCCGGCACTGGAATATGCTACACGAGGGTGTTGTAATTTGTATCCTCTTTTTGTAATTGACCCGCATTATATGGAACCCGATCCGAATGCTTTCTCGCCCGGTTCATCTCGTGCGGGTCTGAACCGGATTAACTTCTTGCTTGAGAGTCTAGGTGATCTTGATGTTAATCTGAAAAAGGTTGGTTCGAGATTGTTGGTGCTTAAGGGTGATCCGAGTGAAGTTCTTATTCGGTGCTTGAAAGAGTGGAACATTGGAAAGTTATGCTTTGAGTATGACACTGATCCGTATTATCAGGCTCTGGATATTAAAGTCAAGGACTATGCTCTTAAGGCAGGGATTGAGATTTTCTCTCCTGTAAGCCACACACTTTTCAATCCAGCAGATATTATACAGAAGAATGGAGGGAAGCCGCCACTTAGTTATCAATCATTTGTCAAGCTTGCGAGGGAACCGCCATCACCTATCTCAACGAAGTATTCTTCACTCCCTCCAGTTGGTCATCTTGGAAGTTGTGATATTTCTGAAGTTCCAACCATCAAAGACCTTGGATATGAAGATGATCAACTGGAGTTCTCTCCGTTCAAAGGCGGCGAATCAGAAGCATTGAAGAGATTAGAAGAATGCATGAAAGACAAGAAGTGGGTGGCAAACTTTGAGAAACCTAAGGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTATTTTATCACCTTACTTGAAATTTGGTTGTCTTTCTTCCAGATATTTCTACCAATGCATTCAAGATGTGTATAAAAGTTTGCCAAAACATACTTCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGATTTCTTTTACACCGCAGCTTTCGGGACTCCAAATTTCGATAGGATGAAAGGCAATAGGATATGTAAGCAGATTCCTTGGAAGGATGATGATAAACTTTTCGAGGCTTGGAGAGATGCTAAGACAGGGTTTCCTTGGATTGATGCTATCATGGTCCAGCTACACCAATGGGGTTGGATGCATCATTTGGCACGGCATTCTGTTGCGTGTTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAGGGACGTGATGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTCTCATGTTCATCTTTCTTTTATCAATATAATCGTATTTATTCTCCAACCACATTTGGTAAGAAGTATGACCCTAACGGTGACTATATTAGACATTTTCTCCCAGTCTTAAAAGATATGCCTAAGGCGTACATCTATGAACCATGGACTGCTCCTCCAAGTGTCCAGTCCAAAGCAAATTGCATAATTGGAAAAGACTACCCAATGCCAGTTGTTTCTCACGATTCTGCAAGTAAAGAGTGCAAAAGGAAAATGGGTGAGACATATGCATTGAATAAAACACTGAATGGTTTGGTTAGTGAAGATGATCTGAAAAGCTTAAGGAGGAAATTGGATGAGGGTGAAGAGCAAGGGACTGAAGCTAAAAGATCTAGGCAACTGCTAATTGGCTGA 1626 0.417 MRLTSSSMGFGSGSLMWFRKGIRIHDNPALEYATRGCCNLYPLFVIDPHYMEPDPNAFSPGSSRAGLNRINFLLESLGDLDVNLKKVGSRLLVLKGDPSEVLIRCLKEWNIGKLCFEYDTDPYYQALDIKVKDYALKAGIEIFSPVSHTLFNPADIIQKNGGKPPLSYQSFVKLAREPPSPISTKYSSLPPVGHLGSCDISEVPTIKDLGYEDDQLEFSPFKGGESEALKRLEECMKDKKWVANFEKPKGNPSAFLKPATTILSPYLKFGCLSSRYFYQCIQDVYKSLPKHTSPPVSLLGQLLWRDFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLFEAWRDAKTGFPWIDAIMVQLHQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIRHFLPVLKDMPKAYIYEPWTAPPSVQSKANCIIGKDYPMPVVSHDSASKECKRKMGETYALNKTLNGLVSEDDLKSLRRKLDEGEEQGTEAKRSRQLLIG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0116 541 Pfam FAD binding domain of DNA photolyase 300 496 IPR005101 -
Mal7g0116 541 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 14 506 - -
Mal7g0116 541 PANTHER CRYPTOCHROME 14 506 IPR002081 -
Mal7g0116 541 MobiDBLite consensus disorder prediction 521 541 - -
Mal7g0116 541 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 14 195 IPR036155 -
Mal7g0116 541 Gene3D HUPs 15 223 IPR014729 -
Mal7g0116 541 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 213 501 IPR036134 -
Mal7g0116 541 Coils Coil 515 535 - -
Mal7g0116 541 Pfam DNA photolyase 14 177 IPR006050 -
Mal7g0116 541 Gene3D - 148 309 - -
Mal7g0116 541 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 12 150 IPR006050 -
Mal7g0116 541 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 316 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0116 Mal-Chr7 2844344 2849821 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0116 K02295 - gmx:100780347 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0116 7 2844344 2849821 Mal7g0116 7 2844344 2849821 ECH