Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0018 ATGTGGAGTACTACAGTGTCCATCAGAAGCAGCAACTGCAGCGTTGCTTTCTCTCCTCCGTTTCGAATAATAATAAAAAATTGCACAGACCCAAATCGTGGCTTCGGAGGAGGAGATAATAATAATAATAAGACCAACAAGAAGGCTTCCTTGTCGCAGCAAAACCAAAGGAAATCAACAACCAAACAATCTCAGGCACCGCGTTTAACTTCACAGGTTGGCGGGAAATCTAAAAGCATTTCCTCCGACATTGACTTCGAGGAACGCCTCAAGGCTGTTAAAAGGTCAGCTCTAGAGCAAAAGAAGGCTGAAGAGAAAAAAGAATTTGGAGCAATTGACTACGATGCACCTATTTCTTCAGACAAGAAAACAATTGGCTTTGGTACCAAGGTTGGAATAGGTGTAGCTGTTGCAGTCTTTGGTCTGGTTTTTGCTCTTGGAGATTTTCTGCCATCAGGAAGTCCCAACGAAGACACTGCCGTGGTCAATGATAAATTGTCAGAGAAGGATAAAGCTGTTCTTCAGAGTAGGCTTAAGGAATTTGAAGCGACGTTAAGTAACTCCCCAAGAGATCCAACTGCTCTCGAAGGAGCTGCAGTAACTTTGGCAGAACTAGGAGAGTATGCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAAGAAAAACCAAATGATGCTGATGCTTTTCGTTTGCTTGGAGAAGTAAAGTATGAACTGAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGTTCAGCAAAGGTATCTGAAGATATCAAATTTGAAGTTCTGCGTGGCCTTACCAATTCATTACTTGCTGCCAAGAAGCCAGATGAGGCTGTTCAATTACTTTTGGCCTGTCGTGAGCGTCTGAGTTCAGAAGACTATAGTAAAAAATCTGATAGCAGCCCAACAGACTCGCAGAAGCTGGATCCAATTCAAGTTGAATTACTTCTAGGGAAAGCCTATTCAGACTGGGGCCATGTCGGTGATTCCATAGCTGTTTACGATCAGCTCATATCAACACACCCTGATGATTTTCGTGGATACTTAGCGAAGGGAATCATCCTAAAAGAAAACAAAAACATTGGAGATGCAGAGAGGATGTTCATTCAAGCAAGGTTCTTTGCACCTGATAAAGCTAAAGCACTCGTGGACCGTTATTCAAGATAA 1173 0.422 MWSTTVSIRSSNCSVAFSPPFRIIIKNCTDPNRGFGGGDNNNNKTNKKASLSQQNQRKSTTKQSQAPRLTSQVGGKSKSISSDIDFEERLKAVKRSALEQKKAEEKKEFGAIDYDAPISSDKKTIGFGTKVGIGVAVAVFGLVFALGDFLPSGSPNEDTAVVNDKLSEKDKAVLQSRLKEFEATLSNSPRDPTALEGAAVTLAELGEYARAASLLDDLTKEKPNDADAFRLLGEVKYELKDYEGSVAAYKSSAKVSEDIKFEVLRGLTNSLLAAKKPDEAVQLLLACRERLSSEDYSKKSDSSPTDSQKLDPIQVELLLGKAYSDWGHVGDSIAVYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0018 390 Coils Coil 87 107 - -
Mal7g0018 390 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 22 390 - -
Mal7g0018 390 Pfam Tetratricopeptide repeat 179 233 - -
Mal7g0018 390 SMART tpr_5 313 346 IPR019734 GO:0005515
Mal7g0018 390 SMART tpr_5 192 225 IPR019734 GO:0005515
Mal7g0018 390 SMART tpr_5 226 259 IPR019734 GO:0005515
Mal7g0018 390 SMART tpr_5 261 294 IPR019734 GO:0005515
Mal7g0018 390 SMART tpr_5 347 380 IPR019734 GO:0005515
Mal7g0018 390 MobiDBLite consensus disorder prediction 34 79 - -
Mal7g0018 390 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 22 390 - -
Mal7g0018 390 MobiDBLite consensus disorder prediction 34 80 - -
Mal7g0018 390 Gene3D Tetratricopeptide repeat domain 159 388 IPR011990 GO:0005515
Mal7g0018 390 SUPERFAMILY TPR-like 191 384 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0018 - - gmx:100777868 532.332