Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3681 ATGTCTCTTCATTCTCCAATGATTGTTGAAGAAACAAAACAAAATGACAAGGAAGAAGAAAGAAGAGAATTGGTTGAAGAAGTGAAGACACAGTTATGGTTATCAGGACCATTGATATCAGTTACACTCTTAAATTTTAGTATCAATCTTATTTCAGTTATGTTTGTTGGTCATCTTGGTGAGTTGTCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCTACTGTCACTGGTTTCAATTTATTGTCAGGAATGGCAAGTGCATTGGACACATTATGTGGACAATCATATGGTGCAAAACAGTACCACATGTTAGGCATACACATGCAAAGAGCCATGTTCATTCTCATGATCGTCGCAGTTCCTCTCGCAATTATTTGGGCAAACACAGGATCCATTCTCATTTTACTTAGCCAAGATCCTGAAATATCGACAGAAGCTGGCAACTATGCTAAGTTAATGGTTCCATCCATTTTTGCTTATGGTCTTCTACAATGCCTCAACAGATTCTTACAGACTCAAAATATTGTATTTCCAATGATGTTTAGCTCCGCGGTTACGACATTATTTCATCTTCCTCTATGTTGGATTATGGTATATAAGTCAGGATTAGGTAGCAGAGGTGCTGCCATAGCAAATTCTATATCCTATTGGGTCAATGTTACCATTCTCGCACTCTATGTAAGGTTTTCTCCTTCATGTAATAAAACATGGAATGGTTTTTCCAAGGAAGCACTTGCACCGAACAGTATCCCTATTTTCCTGAAGCTTGCCATTCCTTCAGCAGTAATGGTTTGCTTGGAAATGTGGTCATTTGAATTAATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCAAAGTTGGAAACATCAGTGCTTTCTATCTGTTTGAATACAACAGGAGTTGTTTGGATGATCCCCTTTGGACTTAGTGGAGCTATAAGCATTCGCGTTTCAAATGAACTTGGGGCTGGTCATCCACAAGTCGCACGTTTGGCAGTGTGCATTGTTGTAGTGATTGCCGTTATTCAAAGCATCTTAGTTGGAGCAGTGATTATACTAATTCGCAATATATGGGGTTATGCTTATAGCAATGAAGAAGAAGTTGTCAAATATGTAGCAACTATGATGCCAATTCTTGCAGTCTCTCACCTCCTAGACGGAATGCAAGCTGTTCTTTCAGGAATTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCGTTTGTCAATCTTGGATCATACTATTTAGTTGGGATTCCAGCAGCCGTTGTATTAGCTTTTGTATTACATATTGGTGGGAAGGGGCTGTGGATGGGGATCATTTGTGCACTCATTGTTCAAGTGTTTTGTCTAACACTCATTACAATACGCACTGATTGGGAGAAAGAGGCAAAGAAGGCTAATGATAGAGTTTATAATGCAATAACAACTGAGAGTTTAGTCTCATAA 1446 0.3935 MSLHSPMIVEETKQNDKEEERRELVEEVKTQLWLSGPLISVTLLNFSINLISVMFVGHLGELSLSGASMATSFATVTGFNLLSGMASALDTLCGQSYGAKQYHMLGIHMQRAMFILMIVAVPLAIIWANTGSILILLSQDPEISTEAGNYAKLMVPSIFAYGLLQCLNRFLQTQNIVFPMMFSSAVTTLFHLPLCWIMVYKSGLGSRGAAIANSISYWVNVTILALYVRFSPSCNKTWNGFSKEALAPNSIPIFLKLAIPSAVMVCLEMWSFELMVLLSGLLPNPKLETSVLSICLNTTGVVWMIPFGLSGAISIRVSNELGAGHPQVARLAVCIVVVIAVIQSILVGAVIILIRNIWGYAYSNEEEVVKYVATMMPILAVSHLLDGMQAVLSGIARGCGWQKIGAFVNLGSYYLVGIPAAVVLAFVLHIGGKGLWMGIICALIVQVFCLTLITIRTDWEKEAKKANDRVYNAITTESLVS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3681 481 CDD MATE_eukaryotic 29 465 IPR045069 GO:0042910|GO:1990961
Mal6g3681 481 MobiDBLite consensus disorder prediction 1 20 - -
Mal6g3681 481 PANTHER PROTEIN DETOXIFICATION 10 469 - -
Mal6g3681 481 Pfam MatE 260 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g3681 481 Pfam MatE 37 197 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g3681 481 Coils Coil 8 28 - -
Mal6g3681 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 10 469 - -
Mal6g3681 481 TIGRFAM matE: MATE efflux family protein 37 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3681 Mal-Chr6 107630351 107638953 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3681 K03327 - gmx:100815319 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3681 6 107630351 107638953 Mal6g3681 6 107630351 107638953 ECH