Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3614 ATGGCTGATGCATTTGATGAGGAGTGTGATTATCTCTTCAAAACTGTTCTAATTGGAGATTCTGGAGTTGGGAAATCAAATCTTATTACAAGGTTTACAAAAGATGAATTTCGACTTGATTCCAAACCAACCATAGGTGTGGAATTTGGTTACAAGAACATCAAGGTTAGAGACAAGCTCATCAAATCACAAATATGGGACACTGCCGGCCAAGAGAGGTTTAGAGCTATCACAAGCTCATACTATAGGGGAGCATTAGGGGCAATGCTAGTCTATGACATAACTAGGCTAACAACTTTTGTTAATATAAAAAAATGGTTACATGAGCTTAGAGAGTTTGGAAATGAAGACATGGTGATAATTCTAGTTGCAAATAAATCTGATTTGAGTCAATCAAGGGAAGTTGAGAAAGATGAAGGACAAGGGTTTGCAGAAAAAGAAGGTTTATGTTTTATGGAAACCTCTGCTTTGCAAAATTTGAATGTTGAGGAAGCATTTTTACAAATGATTACTATGATCCATGATATCATTAGCCAAAAAAGTTTGGATGATAAAATGAATGGAACAAAGTTAAGTCTTCCTAATGGGAAGGAAATTCATATAGCTGATGAAGTGACTGCTACTAAACAAGTCAATTGTTGTTCAAGATGA 651 0.3533 MADAFDEECDYLFKTVLIGDSGVGKSNLITRFTKDEFRLDSKPTIGVEFGYKNIKVRDKLIKSQIWDTAGQERFRAITSSYYRGALGAMLVYDITRLTTFVNIKKWLHELREFGNEDMVIILVANKSDLSQSREVEKDEGQGFAEKEGLCFMETSALQNLNVEEAFLQMITMIHDIISQKSLDDKMNGTKLSLPNGKEIHIADEVTATKQVNCCSR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3614 216 SMART ras_sub_4 10 176 - -
Mal6g3614 216 ProSiteProfiles small GTPase Rho family profile. 6 174 - -
Mal6g3614 216 TIGRFAM small_GTP: small GTP-binding protein domain 12 166 IPR005225 GO:0005525
Mal6g3614 216 Gene3D - 5 214 IPR027417 -
Mal6g3614 216 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 215 - -
Mal6g3614 216 SMART rab_sub_5 13 176 - -
Mal6g3614 216 ProSiteProfiles small GTPase Ras family profile. 7 202 IPR001806 GO:0003924|GO:0005525
Mal6g3614 216 CDD Rab11_like 10 174 - -
Mal6g3614 216 Pfam Ras family 14 173 IPR001806 GO:0003924|GO:0005525
Mal6g3614 216 PRINTS Transforming protein P21 ras signature 13 34 - -
Mal6g3614 216 PRINTS Transforming protein P21 ras signature 54 76 - -
Mal6g3614 216 PRINTS Transforming protein P21 ras signature 36 52 - -
Mal6g3614 216 PRINTS Transforming protein P21 ras signature 116 129 - -
Mal6g3614 216 PRINTS Transforming protein P21 ras signature 151 173 - -
Mal6g3614 216 PANTHER DRAB5-RELATED 1 215 - -
Mal6g3614 216 ProSiteProfiles small GTPase Rab1 family profile. 8 214 - -
Mal6g3614 216 SMART rho_sub_3 15 176 IPR001806 GO:0003924|GO:0005525
Mal6g3614 216 SMART ran_sub_2 18 208 - -
Mal6g3614 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 187 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3614 Mal-Chr6 105762803 105767025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3614 14 166 EF-hand Containing Proteins AT5G27540 29.586 9.62e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3614 K07976 - gmx:100815793 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3614 6 105762803 105767025 Mal6g3614 6 105762803 105767025 ECH