Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3540 ATGGAAAGGAAGATGCATTGTGCCCCTCAAATAGAAGGAAATGATAGTCCAAAAGTTTCAGAACTCGGAAACAATTCCAAATCAACGACATACCAGCAACAAAACGAAGTTACATCTTTGGACATCACAAATCATTCTCAAGAATCTTCTGTTTCAAGGATCAACCCTGATAGTAGGTTGGCCATCCTTACATTCCTTAGTTTTGAGCCTGATGGAACCTGGAGAATTTGTGCCGTTCCAGTGCAGTGTCTCAATCACGTTAACCTAGATTCTGGCAACATCAATATGGATAGTCTTCAACTTCTTTTCCCTCCACCTCTTAACAGGCCGAAGATTGATCAATGTAAGGGGCCTAGAGGACAGGTCCCTCCGAGTGCTTATTCAGCCAAATCATATGAAAGAAGAAATTATACTGGTTCAAATGTTCACCGTAGATGTCAAAACAAAGTAGCTAGCAAAGCTTGTAAACTGAACGAACTTCCTGTGAACTCTTGTGCACGAAGTTCGGTAGTTAGTAGTAGTCCTACCTTGTCACCTCATAGTTCTGCCTCCGTTATTTCGTCCGACAAGTGCATGAGTAACACCAAGGAAGATAAGTCTCTGAAGAAAAATTCGAAAAAAAAGACAAGAAAGAAAGTTAAACAGATTAAGAAGCAGCCAAGTGAAAGTGGATCTAATGATAGAGAAGTTCGCACCGAGGAATATGGCTGTGTAAGTTTGACTTCTGAAACCTGCAGCAGCAATGATGTGGATACGACTGCACCGGAATTTTCATCTTCCGATGATAGGTTAACGAAAATTGATTTTGAAAGGAATGGGATGAATGACAAAATCAATGTTACGGATGCACCGAAACGCTGTGACTCTTGTATCGATGAGGCAGTGATGTCAAAAGCTGAATCAAGGAATCAGCTTCACGATACAGAAACAAAGGATACTCAACACGTTGAGCTCTGCTGTTTGAATGATATACAAGACTCTTTGGTGTTGGATTCAGTTTCAATTGGTTCGAAAAGTGATGAAAGTGTCAATGGTGGTGATATAGGAAAATCGTTCAAAAAGGAAATTTGTGGAGTCGCTTCAAATTCAGGAGATGAGTATTTTCTCCATCAAGGCTTAACAAACGGTTTTCGCAATAACCATGAACATAACGAGGAAACGAAGAACGGTAGTCAAAATTGCGTAGTCAATGATAAGAGATTTCAGCAAAAGAGAAATATGTCGAAGAGTTCTAGTTTCAACAAATTTTCGGGTGTTGGCGTTGTGCACGGTCGCACAGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAACAGTTCAAGTGAATGTGGCGGTGGTGATTTGAAGAAAGTAAACGCAACTTCGGCACAATTCATTTCCGCTACTGAAAAGGATCCTTCAGCTATCAAAACTTGTAATAATTCTGTTGGCGTAAATGTTGTTTCAGGACCAGAGGATAAAAAACACGTGAAAAATAAAGTCGGTCGAAAATCAAAAGGTAAAACGGATTCTGTTCCAACAAAAGGACCTTCCAATCATTCTAGGAAGGGTTCCAATTTTAACAGGACTGTGTTAAATGATAACTTGAAGGTTAGTATTCAACAGAGTGATTCTTCAAATATCTCATCTCAGGAAAATAATCAACAGGGATTGGTAATGGAGTTTCAGACCAATGGAGTTGAACAGGAAACATCTGAAATAGTTCACAGCGAACAATTTCATGCGGATGAGTCCGATATCCCGAAAAGTTCACAGGAAACAAAGAATGAAAGTATCGACATTCAATCTCAAGTTTCTTGTTCTGATGAGCAATCTCAAGTTTCTTATAATCTTGTAGATAATAAACTTGGTCAAACACTGAAAGAAGTTTCTTCTGCAGATTACAATGCACAAAACCACAATTCTGGATCTGCAACCCTATGGAAATGGATACCAGTTGGGAAAAAAGATACCGGGATGGAAAAATCCGAGTCTAATAGTTCATCATCAGAATATTCTGATGAACCAACTAGTAAAAATTTTGATTTGGAAAACGGACTGAAACCCAAATCAGATTCTTTTTCTCAAAATCAGGATTCTTCACCAGATGCAAGAACTGTGTCCATTGGTTGCATCGAGGGTGAGAATCATAAACTAGGTGAGGAGATTGCAGGTACAATGACCGAGCTTATGGACAAACATCAAGTAGATAATCACATAATTTATGAATGTGAGAATCAATATACGTTAGAAAATGATTCCTATAGAATAGCTCAAGCGGTGAATGACGCCTGCCAAGTTCAATTAGCTTGTGAAGCAGTACACAAGGCGACTGGTGGTCCTGTTGCAGAGTTTGAAAGACTACTTCATTTTTGTAGTCCTGTTATTTGTCGATCACCCGATTCACTTGGTGGTTTCACCTGTGCAAAAAATCATTTGATTGGTGTCCCACTGTGCAGACATGAGATACCTGAAGCATCTTTGGGATGCTTGTGGGAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGGGCTTGGGATTATGAATGTCCAAAGACATTAGGTGGTGTTGGTCATTCTCCGTTTCGTGCCTATTTTGTCCCTTCTTTATCAGCGGTTCAACTGTTTAAGAACAATGAAAGTCGATGTGTGAACAGAAGTGAGAGCTTTCTGAATTGTAAGGTTTTGGAGGCATGCGAAGTGATTGACAATTCAGAAGACTCAATTATGGCTCGTTTCAATAATGCCTCTAATCCATCTACTGACTCAAGCTGTTCCAGTGACTTAGAACTTCTTTTTGAATATTTTGAAAGCGAACAACCTCAACAAAGACGGCCTCTATATGAAAGGATACAAGAGCTGGTTAGAGGCGATGTACCAATCCAGTCAAAAACTTATGGGGACGCAACTAAACTGGAATCGATAAACCTGCGAGATCTTCATCCTGGATCTTGGTACTCGGTTGCATGGTATCCTATTTACCGTATACCAGATGGCAACTTTCGCACATCTTTTCTGACCTACCATTCACTTGGACATTTGGTTTGTAGAAGTTCAAATTCTGCTTCACCAACTCTAAATTCTTGCATAGTTTCTCCAGCTGTAGGTCTTCAAAGTTACAATGCACAGGGTGAATGCTGGTTTCAGCTGAATCAATCTGCACTGACAGCAGAAATGCTAGGCGTAAACCCCTCAATAATTCTTAAAGAGCGTTTGAGGACACTTGAAGAAACTGCATCTCTTATGGCAAGAGCTGTTGTCAAAAAGGGGAACGAAAAGTGCACAAATAAACATCCAGATTATGAGTTTTTCTTGTCGAGGCGACGGTATTGA 3327 0.3995 MERKMHCAPQIEGNDSPKVSELGNNSKSTTYQQQNEVTSLDITNHSQESSVSRINPDSRLAILTFLSFEPDGTWRICAVPVQCLNHVNLDSGNINMDSLQLLFPPPLNRPKIDQCKGPRGQVPPSAYSAKSYERRNYTGSNVHRRCQNKVASKACKLNELPVNSCARSSVVSSSPTLSPHSSASVISSDKCMSNTKEDKSLKKNSKKKTRKKVKQIKKQPSESGSNDREVRTEEYGCVSLTSETCSSNDVDTTAPEFSSSDDRLTKIDFERNGMNDKINVTDAPKRCDSCIDEAVMSKAESRNQLHDTETKDTQHVELCCLNDIQDSLVLDSVSIGSKSDESVNGGDIGKSFKKEICGVASNSGDEYFLHQGLTNGFRNNHEHNEETKNGSQNCVVNDKRFQQKRNMSKSSSFNKFSGVGVVHGRTGKENSHSVWQKVQKNSSSECGGGDLKKVNATSAQFISATEKDPSAIKTCNNSVGVNVVSGPEDKKHVKNKVGRKSKGKTDSVPTKGPSNHSRKGSNFNRTVLNDNLKVSIQQSDSSNISSQENNQQGLVMEFQTNGVEQETSEIVHSEQFHADESDIPKSSQETKNESIDIQSQVSCSDEQSQVSYNLVDNKLGQTLKEVSSADYNAQNHNSGSATLWKWIPVGKKDTGMEKSESNSSSSEYSDEPTSKNFDLENGLKPKSDSFSQNQDSSPDARTVSIGCIEGENHKLGEEIAGTMTELMDKHQVDNHIIYECENQYTLENDSYRIAQAVNDACQVQLACEAVHKATGGPVAEFERLLHFCSPVICRSPDSLGGFTCAKNHLIGVPLCRHEIPEASLGCLWEWYEKHGSYGLEIRAWDYECPKTLGGVGHSPFRAYFVPSLSAVQLFKNNESRCVNRSESFLNCKVLEACEVIDNSEDSIMARFNNASNPSTDSSCSSDLELLFEYFESEQPQQRRPLYERIQELVRGDVPIQSKTYGDATKLESINLRDLHPGSWYSVAWYPIYRIPDGNFRTSFLTYHSLGHLVCRSSNSASPTLNSCIVSPAVGLQSYNAQGECWFQLNQSALTAEMLGVNPSIILKERLRTLEETASLMARAVVKKGNEKCTNKHPDYEFFLSRRRY* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3540 1108 MobiDBLite consensus disorder prediction 487 506 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 507 526 - -
Mal6g3540 1108 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 5 1107 - -
Mal6g3540 1108 Pfam Protein of unknown function (DUF789) 779 1102 IPR008507 -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 479 526 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 17 34 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 659 676 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 168 232 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 685 701 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 216 232 - -
Mal6g3540 1108 PANTHER DUF789 FAMILY PROTEIN 5 1107 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 576 603 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 1 34 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 654 702 - -
Mal6g3540 1108 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3540 Mal-Chr6 104285685 104293013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3540 - - mtr:MTR_6g077930 1772.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3540 6 104285685 104293013 Mal6g3540 6 104285685 104293013 ECH