Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3532 ATGTCGCCGTCAAATGGGTTGTGTAACGGCGGTGGAAGTGGTGGTGGTGTTGGTGGTAATGGGTTGAGTTATATTGAACATCATGTTTCAAAATTTGATACTCTTGCTGGTGTTGCTATTAAGTATGGTGTTGAGGTAGCTGATGTCAAAAGGATGAATGGTTTGGCCTCAGATCTCCAAATGTTTGCATTGAAGACATTGAGAATTCCCCTACCAGGACGACATCCACCATCTCCGGTTCCTGATGAACCTGCCAAGTTGAGAGATAATAGCGGCGAGAGAAGACCTCCCCGCAATGGTCAATCTGCGATGAAGGAACCTCTACAGTCCTTAAGACTGAAACCGCCTAAACAGAAGATTTCTCCAGCCATGACCATTTTACAGAAATACTATGGACTTGACTCGTCCAGTTCCAGAGATACATCTGGAGAAACAGAATTGGCGATGTATACATCTTCTACTTCAGATCATTCCAGAGATGATTGGCTTCCTAAACCCTCACCAATTCCAAACGGTCATTCGAAGTCAACAAATTTAACTTTTGACCTACTGACTGGAAACGACGAAGTGTCAGAGTATGTGCCTTTTGCAGATTTCGGCGATGGGGGATCTGATAAGTCTGATGAGAAATCCGTCCGCAGACGTCAAAAAGCCGATGTTGATAATGGAGGTACTACACCAGAAAGGCTTTTCAGAGAAGGCAATAATAGTAACGGATCAAACGGTTCTTCTTCCGCTGGAAAAACATTTTCCATGAGGCCAAAATCAGCTAGTCGAGCCTCTCTGTTTCCCGAGTCAGATTCAGGATGGTTGGATTCTATTTCAGTAGGTTTAGGAGAATCAATCTTTACTGACGGGCTTTCTGGAGTACGCAAATCATCGAGCGCATCAAGCCTTAGAGAGCAGGAAAAATACAATTCAGCAGCAACAGCGTGGCCAACCATTTCCAAACCTATCTTTGATGGCTTACCTATCCCAATAACCGGTCGCAGAAGCAAAACTGCCCTTGATTAG 1014 0.4448 MSPSNGLCNGGGSGGGVGGNGLSYIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLASDLQMFALKTLRIPLPGRHPPSPVPDEPAKLRDNSGERRPPRNGQSAMKEPLQSLRLKPPKQKISPAMTILQKYYGLDSSSSRDTSGETELAMYTSSTSDHSRDDWLPKPSPIPNGHSKSTNLTFDLLTGNDEVSEYVPFADFGDGGSDKSDEKSVRRRQKADVDNGGTTPERLFREGNNSNGSNGSSSAGKTFSMRPKSASRASLFPESDSGWLDSISVGLGESIFTDGLSGVRKSSSASSLREQEKYNSAATAWPTISKPIFDGLPIPITGRRSKTALD* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3532 337 CDD LysM 33 69 IPR018392 -
Mal6g3532 337 MobiDBLite consensus disorder prediction 229 256 - -
Mal6g3532 337 PANTHER OS06G0729900 PROTEIN 2 337 - -
Mal6g3532 337 MobiDBLite consensus disorder prediction 202 222 - -
Mal6g3532 337 ProSiteProfiles LysM domain profile. 25 69 IPR018392 -
Mal6g3532 337 SMART LysM_2 26 70 IPR018392 -
Mal6g3532 337 MobiDBLite consensus disorder prediction 134 175 - -
Mal6g3532 337 MobiDBLite consensus disorder prediction 195 262 - -
Mal6g3532 337 MobiDBLite consensus disorder prediction 134 157 - -
Mal6g3532 337 MobiDBLite consensus disorder prediction 70 116 - -
Mal6g3532 337 PANTHER LOC443603 PROTEIN-RELATED 2 337 IPR045030 -
Mal6g3532 337 Gene3D LysM domain 21 76 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3532 Mal-Chr6 104204998 104207684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3532 - - aip:107644597 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3532 6 104204998 104207684 Mal6g3532 6 104204998 104207684 ECH