Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3209 ATGGGTTCCGCTTCTCTTCTCAATTCTCTAGATCCTGGTGTTAAGGACAGCACGAGTAAAGAGGACCCTGTTGTTTCGAACACCGAAGAGGAAGTTATGGCTGGTGGCAAGCAAAAGAAGCGAAGTTTGTCAGAGAGTAGTGAGCAGCCTGCTCCTACTCGTAAAATGCCAAAACGATCAGCGAGTGCAGCAACTAAAAGTTTGAAGGAGAAGTCTTTTTCCAAATCTGATAAGTCTGATCTTATTGAAACAAAGAAGGATCAGGTTGTAGAAGAAGAATTTCTAGCTGTCCGTATGACTGCTGGACAGGAAGATGGCCGTCCAAATAGAAGAATCACAGACTTCATCCTTCATGATGAATCTGGTGCAGCACAGCAACTTGAGATGCTTGAAATCAATGATTTGTTCATCACTGGACTTATATTGCCACTGGAACCAAGCACAGACAAGAAAAAAGAGCAAGGTGTTCGATGTGAAGGCTTTGGTCGAATTGAATCGTGGGATATATCTGGCTATGAAGACGGTGCTCCAGTGATATGGATTTCTACTGATATTGCTGATTACGATTGCCAGAAACCAGCTGCTAGTTACAAAAAATATTATGATCAATTCTTTGAAAAGGCCCGTGCTTGCATTGAAGTATACAAAAAACTAACAAAGTCTTCTGGTGGAGACCCTGACATAAGTCTCGATGAGTTACTTGCTGGCTTGGCACGGTCCATGAGTGGTAGCAAGTTCTTTTCTGGAGCTGCATCTCTGAAGGAGTTCATTATTTCTCAGGGAGATTTTATTTATAAGCAGCTCATTGGTTTAGACATGACGTTGAAGGCCAATGACAAGGGGTTCACAGAAATTCCTGCTCTTGCTGCTCTTAGAGATGAGAGTAAGAAACAAGCAAACTTTGCAAGCGCACAGGTGATGCCATCAAATGCGACTTTAAGGATTGGTTCGGGAACTGGAGATGACGAGAAGAAGGATCAGATGGATTCTGTAGATGAAGAAGATGAAGATGTAAAGTTAGCAAGACTATTGCAGGAAGAAGAGTACTGGAAATCTAAGAAGCAGAGGAAAAACCCTAGATCATCCTCATCATCTAACAAATTTTATATCAAAATTAATGAAGATGAGATAGCCAATGATTACCCTCTCCCTGCTTATTATAAAACTTCTCTTCAAGAAACAGATGAGTTTATCGTTTTTGATAATGACTATGATGTGTATGACACTGAAGATCTTCCTAGAAGCATGCTGCATAATTGGGCTTTATACAACTCTGATTCTAGATTGATTTCCTTGGAACTTCTTCCTATGAAACCTTGCTCAGAGATAGATGTTACAATCTTTGGATCAGGTGTAATGACTTCAGATGATGGAAGTGGGTTCAATCTCGATACAGAGGCTGGCCAATCTTCCAGTGCTTCTGCAGAACAAGCCACCGATGGAATTCCAATTTATCTGAGTGCCATAAAAGAATGGATGATTGAATTTGGGTCTTCTATGGTTTTCATATCCATCCGAACAGATATGGCCTGGTATAGACTTGGCAAACCATCAAAGCAGTACTCTCCTTGGTACGACACCGTATTGAAAACTGCAAGGATTGGTATAAGCATTATCACATTGTTGAAGGAGCAGAGCCGTGTATCACGACTTTCCTTTGCAGATGTCATAAAAAAAGTATCTGAGTACACTCAAGACAATAGGTCATACATTTCTTCTGATCCATTGGCTGTGGAGAGATTTGTTGTTGTCCACGGACAGATAATTCTGCAACTGTTTGCAGAATTTCCAGATGAAAAGATCAGGAAGTGTCCTTTTGTGGCCGGTCTTGTGAGCAAAATGGAAGCGCGTCACCATACCAAATGGTTGATGAAGAAGAAGAAAGTGTTGCCAAGGAGTGAGCCAAATTTAAATCCTAGGGCAGCAATGGCTCCTGTTGTATCCAAAAGGAAAGCTATGCAAGCAACAACAACAAAGCTGATAAATAGAATATGGGGAGAGTATTACTCAAACCACTTGCCGGAGGATTCAAAAGAGGGAATTGCTACTGAAGTAAAGGATGATGATGATGAAGCTGAGGAACAAGAACAGGAAGAGAATGAAGAGGAGGATGTGGAGGAGGTGACAGTAATGTTGGAGGGAATGCAAAAGCCGCGCTCAGCTTCCAAACAAATTAAAGCGTTTTCTGACGACGGAGAAATTAGATGGGAAGGGGGTCCTGAAGGGAAGACCAGTTCTGGATTGCTTCTTTATAAGCAGGCAATTATTCACGGTGAAGTTGTTTCTGTTGGAATATCTGTATCGGTTGAAGTAGATGAGTCAGATGAACTTCCTGATATATATTACGTTGAATATATGTTTGAATCGAAGGGTGGGAAAAAAATGTTTCACGGTAGGATGATGCAGCATGGTTGTCAGACTGTTCTTGGCAATGCAGCTAACGAGAGAGAGGTGTTTTTGACTAATGAGTGCAGGGATTTGGGACTGCAGGATGTTAAGCAGATAAATGTTGTAAGCATCCGAAAAACACCTTGGGGGTATCAACATCGAAAGGATAACATCGTTGCAGATAAAATCGACAGGGAAAGAGCAGAAGAAAGGAAAAAGAATGGACTGCCTATTGAATATTACTGCAAAAGCTTGTACTGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCGTTTGATACACTGGGTCTAGGGTCTGGCATCTGTCAATCTTGCAAGTTACAGGAAGCTGAAGAGGAGAAGGACGTTTTCAAAGTAAATTCATCCAAGTCTAGTTTTGCATTGGAGGGAACTGAATATTCTCTCAATGACTATGTTTATGTCAGTCCTTTTGAATTTGAGGGAAGAATAGAGCAGGGAACTCATAAGAGTGGGAGGAATGTAGGGTTGAAAGCTTATGTTGTGTGCCAAGTGCTCGAGATCATTTCCAAAAAGGAAACAAAACAAGCCGAAATAAAATCTACAGAGCTCAAAGTCAGAAGGTTCTTCCGACCGGAAGATGTATCAAGTGAGAAGGCATACTGCTCTGATGTACAAGAGGTGTATTACAGTGATGAAACATGTACAATATCTGTACAATCCGTAGAAGGTAAATGTGAAGTCAGGAAAAAGATTGATGTCCCTGAAGGAAGTGCCCCTGGTATCTTCAATAACGTCTTTTTCTGCGAGCACTTGTATGATCCTGCCACTGGATCACTCAAGAAGTTGCCAGCTCATATCAAAGTAAAATATTCTAGTGGACATACAGCTGATGCCGCAGCTAGAAAGAAAAAGGGAAAATGTAAAGAGGGAGATAGCATTCCAGAGCCTGATCTAGAAAGAAAAACATCAAATGAAAAACGTTTAGCAACCTTGGACATTTTTGCAGGATGTGGTGGCTTATCAGAGGGGTTGCATCAGTCTGGTGTTTCATCAACTAAATGGGCTATTGAGTATGAAGAACCAGCTGGGAATGCGTTTAAAGCTAATCATCCTGAAGCGTTGGTGTTTATTAACAATTGCAATGTTATTCTTAGGGCTATAATGGAGAAATGTGGGGACATAGATGATTGTATCACAACGACGGAGGCTGCAGAATTGGCCTCTAAACTTGATGAGAAGGATTTAAGTAATTTACCCTTGCCTGGGCAAGTTGATTTTATTAATGGAGGACCTCCATGCCAGGGTTTCTCTGGGATGAATAGATTTAATACAAGCACTTGGAGTAAAGTCCAGTGTGAGATGATATTAGCATTCTTGTCCTTTGCTGATTATTTCCGGCCAAGGTATTTCCTGTTGGAGAATGTGAGGAACTTTGTGTCTTTTAATAAAGGACAGACATTCCGTTTAACTTTGGCTTCACTACTCGAGATGGGTTATCAGGTGAGGTTCGGTATCCTCGAGGCTGGAGCTTTTGGTGTTTCACAGTCAAGAAAAAGGGCATTTATATGGGCTGCCTCTCCAGAGGACGTGCTTCCCGAGTGGCCAGAACCAATGCATGTCTTTTCTGCTCCTGAATTGAAAATCAATTTGTCAGAAAAAGTCCAGTATGCTGCCGTCCACAGTACTGCAAATGGGGCCCCGTTACGTGCAATAACTGTTCGGGATACCATTGGTGAACTCCCCGCTGTAGGCAATGGAGCCTCTAGGACAAACATGGAGTATCAAAGCGATCCTGTATCATGGTTTCAAAAGAAGATTCGAGGCAATATGGCTGTGTTGACTGATCATATATCAAAGGAGATGAATGAGTTGAACTTGATTCGATGTCAGAAAATTCCTAAGAGACCAGGTTGTGATTGGCGTGATCTTCCAGATGAAAAGATAAAACTGTCAAGTGGACAACTTGTTGATTTGATACCATGGTGCTTGCCAAACACTGCTAAGAGGCATAATCAATGGAAGGGACTCTTTGGTAGATTGGATTGGCAAGGGAATTTCCCAACTTCCATCACTGACCCTCAACCAATGGGGAAGGTTGGAATGTGCTTCCATCCTGATCAAGATAGAATTCTTACTGTTCGTGAATGTGCTCGATCTCAAGGCTTCCCAGATTGCTATCAATTTTATGGTAACATCATACACAAACACAGGCAGATTGGTAATGCTGTTCCTCCTCCTCTGGCATTTGCATTAGGGACGAAACTCAAGGAAGCAGTGGATAGTAAGAGCTCCAAGTAG 4665 0.4184 MGSASLLNSLDPGVKDSTSKEDPVVSNTEEEVMAGGKQKKRSLSESSEQPAPTRKMPKRSASAATKSLKEKSFSKSDKSDLIETKKDQVVEEEFLAVRMTAGQEDGRPNRRITDFILHDESGAAQQLEMLEINDLFITGLILPLEPSTDKKKEQGVRCEGFGRIESWDISGYEDGAPVIWISTDIADYDCQKPAASYKKYYDQFFEKARACIEVYKKLTKSSGGDPDISLDELLAGLARSMSGSKFFSGAASLKEFIISQGDFIYKQLIGLDMTLKANDKGFTEIPALAALRDESKKQANFASAQVMPSNATLRIGSGTGDDEKKDQMDSVDEEDEDVKLARLLQEEEYWKSKKQRKNPRSSSSSNKFYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDVYDTEDLPRSMLHNWALYNSDSRLISLELLPMKPCSEIDVTIFGSGVMTSDDGSGFNLDTEAGQSSSASAEQATDGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYSPWYDTVLKTARIGISIITLLKEQSRVSRLSFADVIKKVSEYTQDNRSYISSDPLAVERFVVVHGQIILQLFAEFPDEKIRKCPFVAGLVSKMEARHHTKWLMKKKKVLPRSEPNLNPRAAMAPVVSKRKAMQATTTKLINRIWGEYYSNHLPEDSKEGIATEVKDDDDEAEEQEQEENEEEDVEEVTVMLEGMQKPRSASKQIKAFSDDGEIRWEGGPEGKTSSGLLLYKQAIIHGEVVSVGISVSVEVDESDELPDIYYVEYMFESKGGKKMFHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQDVKQINVVSIRKTPWGYQHRKDNIVADKIDRERAEERKKNGLPIEYYCKSLYWPERGAFFSLPFDTLGLGSGICQSCKLQEAEEEKDVFKVNSSKSSFALEGTEYSLNDYVYVSPFEFEGRIEQGTHKSGRNVGLKAYVVCQVLEIISKKETKQAEIKSTELKVRRFFRPEDVSSEKAYCSDVQEVYYSDETCTISVQSVEGKCEVRKKIDVPEGSAPGIFNNVFFCEHLYDPATGSLKKLPAHIKVKYSSGHTADAAARKKKGKCKEGDSIPEPDLERKTSNEKRLATLDIFAGCGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAIMEKCGDIDDCITTTEAAELASKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKINLSEKVQYAAVHSTANGAPLRAITVRDTIGELPAVGNGASRTNMEYQSDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGCDWRDLPDEKIKLSSGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDCYQFYGNIIHKHRQIGNAVPPPLAFALGTKLKEAVDSKSSK* 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3209 1554 ProSiteProfiles BAH domain profile. 933 1072 IPR001025 GO:0003682
Mal6g3209 1554 Gene3D Vaccinia Virus protein VP39 1122 1325 IPR029063 -
Mal6g3209 1554 Gene3D DNA Methylase, subunit A, domain 2 1367 1443 - -
Mal6g3209 1554 Gene3D DNA Methylase, subunit A, domain 2 1444 1510 - -
Mal6g3209 1554 MobiDBLite consensus disorder prediction 1086 1111 - -
Mal6g3209 1554 Coils Coil 678 705 - -
Mal6g3209 1554 MobiDBLite consensus disorder prediction 15 44 - -
Mal6g3209 1554 Pfam Cytosine specific DNA methyltransferase replication foci domain 105 239 IPR022702 -
Mal6g3209 1554 Pfam Cytosine specific DNA methyltransferase replication foci domain 410 563 IPR022702 -
Mal6g3209 1554 MobiDBLite consensus disorder prediction 312 336 - -
Mal6g3209 1554 Pfam C-5 cytosine-specific DNA methylase 1119 1545 IPR001525 GO:0008168
Mal6g3209 1554 Gene3D - 912 1121 IPR043151 -
Mal6g3209 1554 MobiDBLite consensus disorder prediction 1 81 - -
Mal6g3209 1554 ProSiteProfiles BAH domain profile. 759 893 IPR001025 GO:0003682
Mal6g3209 1554 SMART BAH_4 759 893 IPR001025 GO:0003682
Mal6g3209 1554 SMART BAH_4 933 1072 IPR001025 GO:0003682
Mal6g3209 1554 MobiDBLite consensus disorder prediction 686 704 - -
Mal6g3209 1554 MobiDBLite consensus disorder prediction 685 704 - -
Mal6g3209 1554 Pfam BAH domain 934 1072 IPR001025 GO:0003682
Mal6g3209 1554 Pfam BAH domain 760 893 IPR001025 GO:0003682
Mal6g3209 1554 PRINTS Cytosine-specific DNA methyltransferase signature 1118 1134 IPR001525 GO:0008168
Mal6g3209 1554 PRINTS Cytosine-specific DNA methyltransferase signature 1255 1269 IPR001525 GO:0008168
Mal6g3209 1554 PRINTS Cytosine-specific DNA methyltransferase signature 1301 1314 IPR001525 GO:0008168
Mal6g3209 1554 PANTHER DNA (CYTOSINE-5)-METHYLTRANSFERASE 1B 278 1552 - -
Mal6g3209 1554 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 1117 1551 IPR001525 GO:0008168
Mal6g3209 1554 CDD BAH_DCM_I 772 894 - -
Mal6g3209 1554 ProSitePatterns C-5 cytosine-specific DNA methylases C-terminal signature. 1526 1544 IPR031303 -
Mal6g3209 1554 TIGRFAM dcm: DNA (cytosine-5-)-methyltransferase 1120 1543 IPR001525 GO:0008168
Mal6g3209 1554 CDD BAH_plantDCM_II 928 1129 - -
Mal6g3209 1554 PANTHER CYTOSINE-SPECIFIC METHYLTRANSFERASE 278 1552 - -
Mal6g3209 1554 ProSitePatterns C-5 cytosine-specific DNA methylases active site. 1214 1226 IPR018117 -
Mal6g3209 1554 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1119 1546 IPR029063 -
Mal6g3209 1554 Gene3D - 728 911 IPR043151 -
Mal6g3209 1554 PIRSF DNMT1 680 964 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mal6g3209 1554 PIRSF DNMT1 10 286 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mal6g3209 1554 PIRSF DNMT1 956 1446 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mal6g3209 1554 PIRSF DNMT1 284 688 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mal6g3209 1554 PIRSF DNMT1 1440 1554 IPR017198 GO:0003886|GO:0005634|GO:0090116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3209 Mal-Chr6 94170132 94179223 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3209 K00558 - gmx:100797667 2541.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3209 6 94170132 94179223 Mal6g3209 6 94170132 94179223 ECH