Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3197 ATGGCATTGAAGGATACATTTTACATATCACATGGATCACCAACGTTGTCAATAGATGAATCAATTGTGGCAAGGAAGTTTCTACAATCATGGGAAAAAGATGTGTTTGTAGAGAGACCAAAATCTATTTTGGTTATTTCTGGTCATTGGGACACCACCGTACCAACCGTTAACGTTATTCACACAACCAATGATACAATTCATGACTTCTATGGTTTTCCCAAACCCATGTACCAGCTTAAATATCCAGCACCTGGAGCTCCACATTTAGCTAAAAGGGTGAAGGAACTACTCAACAAATCGGGTTTCAACCGCGTCGATGAAGACAAAAAGCGAGGACTTGATCATGGTGCTTGGGTTCCACTCATGTTAATGTATCCAGAAGCTGATATTCCAGTTTGCCAGCTTTCTGTTCAATCTAACATGGATGGAACTTATCATTATAACTTAGGAAAAGCATTGGCACCTCTTAAAGATGAAGGTGTGTTAATAATTGGTTCTGGAAGTGCTGTTCATAATTTGGGATCACTTAATCCTCGTGCAGGTGTTGCTCCTTGGGCCTTAGAGTTTGATAATTGGTTGAAAGATGCTCTTCTTGATGGAAGATATGAAGATGTAAATCATTATGAACAAAAGGCGCCGCATGCGAAAAAGGCTCATCCATGGCCAGATCATTTTTATCCATTGCATGTTGCTATTGGTGCTGCTGGTGAAAATTCAAAGGCCAAACTTATCCACAGTAGTATTAATATGGGAACTCTCTCTTATGCCTCTTACCAGTTTACATCAGATTCCAGCTAA 801 0.3983 MALKDTFYISHGSPTLSIDESIVARKFLQSWEKDVFVERPKSILVISGHWDTTVPTVNVIHTTNDTIHDFYGFPKPMYQLKYPAPGAPHLAKRVKELLNKSGFNRVDEDKKRGLDHGAWVPLMLMYPEADIPVCQLSVQSNMDGTYHYNLGKALAPLKDEGVLIIGSGSAVHNLGSLNPRAGVAPWALEFDNWLKDALLDGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGENSKAKLIHSSINMGTLSYASYQFTSDSS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3197 266 CDD 45_DOPA_Dioxygenase 6 261 IPR014436 GO:0008270|GO:0016701
Mal6g3197 266 SUPERFAMILY LigB-like 6 261 - -
Mal6g3197 266 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 261 IPR004183 GO:0006725|GO:0008198|GO:0016491
Mal6g3197 266 Gene3D - 2 262 - -
Mal6g3197 266 PANTHER EXTRADIOL RING-CLEAVAGE DIOXYGENASE-LIKE 3 263 - -
Mal6g3197 266 PANTHER UNCHARACTERIZED 3 263 - -
Mal6g3197 266 PIRSF Doxgns_DODA 1 263 IPR014436 GO:0008270|GO:0016701
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3197 Mal-Chr6 93912830 93915447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3197 K15777 - gmx:100798236 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3197 6 93912830 93915447 Mal6g3197 6 93912830 93915447 ECH