Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3108 ATGAGTTTCGCCGCATACAAAATGATGCAACACGCAACCGGAATCGACAACTGTGCTTCCGGTTACCTAACCCACTCCCGCTCCGATTTCACTCCTCCCATCCCTCCTCCCGACTCCGACGACCTCGACCTCGACGCCGCCTCCGATTGGATCCCTCCACAACAATCTCACAACCTCGCTCCTCTTCCCAATCTCGTTGTAACCGCCGCGAATGTGCTTGAGGTTTATATCGTGAGAATTCAACATGATGAGTCTAAATCGGGTTCTGATTCTCGTGTTCTTGATCGTGTTGCTGCTGCGAAACTTGAACTCGTTTGTCATTACAGGTTGCATGGCAATGTTGAAAGCGTGGCTGTGTTGAGCATTGGGGGTGGTGACGCTTCTAGGCGGCGAGATTCTATCATCTTAACTTTTAAAGACGCAAAGATTTCAGTTCTAGAGTATGATGATTCGATCCACGGACTTCGTACCAGTTCTTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCAAGAGGTCCCGTGGCAAAGGTTGATCCTCAAGGCAGGTGTGGTGGAGTTCTTGTCTATGATTTGCAAATGATAATACTAAAGACTACTCAGGCTGGTTCTGGTTTAGTTGGGGAGGATGATGTGTCGGGTTCTGGAGGTGCAGTTGCTGCTCGTGTTGACTCATCTTATATGATAAATCTGCGTGACTTGGATATGAGGCATGTAAAAGATTTCACATTTGTTCATGGCTATATTGAACCTGTGATGGTGATCTTGCATGAACATGAGCTTACTTGGGCTGGGCGTGTATCATGGAAACATAATACTTGCACGATATCAGCACTTAGCATCAGCACAACTTTGAAGCAGCATCCACTTATTTGGTCAGCTGTTAATCTCCCCCACGATGCCTACAAGCTTCTTGCAGTGCCCTCTCCAATTGGTGGTGTTCTTGTCATTGGTGCGAACACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCCTTGAACAGCTACGCTGTTCTCCTTGATAACAGTCAGGAGATGCCAAGGTCAAGTTTCAATGTGGAACTTGATGCTGCCAATGCAACTTGGTTGTTGAATGATGTAGCCTTGCTGTCAACAAAAACTGGTGAACTGCTATTGCTTACTCTTATTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTATCATCAGGTATCACGACAATCGGAAATTCAATGTTTTTTCTCGCCAGTCGATTAGGAGACAGTATGCTGGTGCAATTTTCTTGTGGATCAGGTGTTTCAATGATATCGTCCAATCTAAAAGAAGAGGTTGGTGATTATGACGTAGATGCTTCTTCAGTAAAGAGATTGCGGAGGTCGCCTTCTGATACTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCTTGTATGGATCTGCTCCAAATAGAACAGAATCAGCACAGAAATCTTTCTCGTTTGCAGTGAGGGATTCGTTGATTAATGTTGGTCCTTTGAAAGATTTCTCGTACGGTTTAAGAATAAATGCCGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGTTGTTCTGGTCATGGAAAAAACGGTTCTCTTTGTGTTCTTCGACAATCAATTCGCCCAGAAGTGATTACTGAGGTTGAACTTCCTGGCTGTAAAGGAATTTGGACTGTTTATCATAAGAGCACAAGTTCACTTAATGCTGACTCTTCTAAGCTGGATGAAGATGAGTATCATGCGTACCTTATTATAAGTTTGGAGTCTCGTACTATGGTACTTGAAACAGCTAATGTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAAACACTTGCTGCCGGGAATTTATTTGGGAGACGTCGTGTTATTCAAATCTACGAACGTGGTGCTCGAATTCTGGATGGTCCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCTAACTCTGAATCTAATTATGGATCTGAGAGTGCTTTGGCGCTATCCGTTTCAATAGCTGATCCATACATCTTGCTCAGAATGAGTGATGGAAGTGTTCGACTTTTGGTTGGAGATCCCAGCACCTGCAAAATTTCTGTCACTTCTCCAACTTCATTTGAGAGCTCAAAGGGATCAGTTTCATCATGTACACTGTACCATGATAAAGGACCCGAGCCATGGCTAAGGAAAACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCCATTGATGGCACTGATGGTGTAGTTCAGGACCACGGGGATGTTTTTTATGTTGTATGTTACGAAAATGGCAACCTTGAAATATTTGACGTGCCCAATTTCACTTGTGTTTTCTCTGTGGAAAATTTTCTGTCTGGAAAGAGCCATCTTGTTGATGCTTTGACAAAAGAGGTGCCGAAGGATTCCCAAAAGGTGGATAAAGTTTCTGACGGAGTGGTCAGCCAAGACAGGAAGGATGCCCTGAATATGAAGGTTGTGGAGTTGGCCATGCAGAGATGGCCGGGGAAGCATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGACGGAACAACTCTTTGTTACCATGCATACCTCTATGAAAGTCCAGACAGTACTTCTAAGGTTGATGATTTTGTATCAGCTAGTGGGCCTGTTGGCCTTAGCAATACTAGTGTTTCTCGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTGGATGTACATGCCAGGGAGACATCAAATGGATCCCCTTGTCAACAAATTAATATTTTCAAGAATATTGGTAGTCACGAAGGATTCTTTCTATCGGGGTCAAGACCGGCTTGGGTTATGGTTTTGAGAGAACGGCTTCGTGTTCATCCACAGCTATGTGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAACGTAAATTGCAATCATGGCCTCATATATGTTACATCACAGGGTGTTTTAAAGATATGCCAATTGCCTTCTGGCTCAAACTATGATTGCTACTGGCCTGTACAGAAAGTTCCTCTAAAAGCTACTCCACATCAAGTAACTTACTTTGCAGAGAAAAATTTGTATCCGATTATTGTTTCATTTCCTGTTCTTAAGCCACTAATTCAAGTCATTGCTTTAGTTGACCCCGATGCCAACAATCTGACTGAGAATCAGAATTTAAATTCTGATGAGCAAAGCCGCTTTTATACCATGGAAGAATTTGAGGTTCGTATTATGGAACCAGAACAGTCTGGTGGCCCTTGGCAAACAAAGGCAACAATACCTATGCAAAGTTCAGAAAATGCTCTCACTGTGAGGATGGTTACACTGATGAATACATCGTCAAAAGAAAACGAAACACTTTTAGCCGTTGGTACTGCTTACGTGCAAGGAGAGGATGTTGCTGCAAGAGGGCGTATACTCTTGTTCTCTTTAGGGAAAAATACTGATAATCCACAAACTCTGGTTTCAGAGGTGTACTCAAAGGAATTAAAAGGTGCTATATCTGCCGTGGCTGCACTTCAGGGTCATTTACTACTAGCATCTGGTCCAAAAATTATCCTGCATAAGTGGACCGGCACTGAGTTGATTTTTGTTGCATTTTTTGACGTGCCACCATTGCATGTTGTGAGCTTAAACATTGTAAAAAACTTCATCCTTATTGGCGACATCCATAAAAGCATATATTTTCTTAGTTGGAAAGAGCAGGGTTCTCAACTTAGCTTATTAGCCAAGGATTTTGGTTCTCTTGATTGTTTTGCAACAGAATTTTTGATCGATGGAAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAAAATATCCAGATTTTTTACTATGCACCAAAGATGTCTGAGAGCTGGAAAGGACAGAAGCTTCTTTCAAGAGCCGAGTTTCATGTTGGGGCTCATGTGACTAAATTCTTAAGGTTGCAAATGTTATCCACTTCTGATCGAACTGGTTCTGCTCCAGGCTCAGATAAAACCAATCGTTTTGCTTTGTTATTTGGTACATTGGATGGTAGTATTGGTTGTATTGCTCCTCTTGATGAGATCACATTCCGTAGACTACAGTCTTTGCAGAAAAAGCTCGTTGATGCTGTATCCCACGTTGCTGGCCTAAATCCAAGAGCTTTCAGATTGTTCCATTCTAATGGAAAGGCCCATCGCCCAGGCCCCGACAGTATAGTTGACTGCGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAACTTGAAATTGCTCTCCAGGTTGGAACAACTCGATCACAAATTCTCTCAAATCTAAATGATCTGTCTCTTGGAACAAGCTTCCTGTAA 4356 0.4263 MSFAAYKMMQHATGIDNCASGYLTHSRSDFTPPIPPPDSDDLDLDAASDWIPPQQSHNLAPLPNLVVTAANVLEVYIVRIQHDESKSGSDSRVLDRVAAAKLELVCHYRLHGNVESVAVLSIGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVSGSGGAVAARVDSSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHEHELTWAGRVSWKHNTCTISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVLLDNSQEMPRSSFNVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLSSGITTIGNSMFFLASRLGDSMLVQFSCGSGVSMISSNLKEEVGDYDVDASSVKRLRRSPSDTLQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTSSLNADSSKLDEDEYHAYLIISLESRTMVLETANVLSEVTESVDYYVQGKTLAAGNLFGRRRVIQIYERGARILDGPFMTQDVSFGASNSESNYGSESALALSVSIADPYILLRMSDGSVRLLVGDPSTCKISVTSPTSFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGVVQDHGDVFYVVCYENGNLEIFDVPNFTCVFSVENFLSGKSHLVDALTKEVPKDSQKVDKVSDGVVSQDRKDALNMKVVELAMQRWPGKHSRPFLFGILSDGTTLCYHAYLYESPDSTSKVDDFVSASGPVGLSNTSVSRLRNLRFVRVPLDVHARETSNGSPCQQINIFKNIGSHEGFFLSGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDCYWPVQKVPLKATPHQVTYFAEKNLYPIIVSFPVLKPLIQVIALVDPDANNLTENQNLNSDEQSRFYTMEEFEVRIMEPEQSGGPWQTKATIPMQSSENALTVRMVTLMNTSSKENETLLAVGTAYVQGEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISAVAALQGHLLLASGPKIILHKWTGTELIFVAFFDVPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRTGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQKKLVDAVSHVAGLNPRAFRLFHSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIALQVGTTRSQILSNLNDLSLGTSFL* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3108 1451 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1440 - -
Mal6g3108 1451 Pfam CPSF A subunit region 1084 1416 IPR004871 GO:0003676|GO:0005634
Mal6g3108 1451 Gene3D - 61 449 IPR015943 GO:0005515
Mal6g3108 1451 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 132 666 IPR018846 -
Mal6g3108 1451 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1440 - -
Mal6g3108 1451 Gene3D - 973 1358 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3108 Mal-Chr6 89890826 89911325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3108 K14401 - gmx:100785543 2515.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3108 6 89890826 89911325 Mal6g3108 6 89890826 89911325 ECH