Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3106 ATGGCCCTCGAAACATTACTCACAAGATTCAAAACCGCGTTTTCAAACAGCTTCAACACAGTTCAACACAAAACGACACCATCTTCAAACCCAAACCCAAAACGCATCGCCGTTTTAGCTTTCGAAGTCGCTGGAGTAATGTCGAAGCTTCTGCATCTCTGGCAATCACTTTCCGACGCTTACATAATTCGTCTTCAAAACGACGTCGTTTCACTCGAAGGTATTTCGAAGCTAATCTCAAGCGACAAGTCGTTTCTGTTAAAACTTGCCGTCGCTGAATTTTGCGACTCGCTTCAACTCGTCGCTAACTCCGTCGCTCGATTCAGTCAAAATTGCAATGACCCATCACTTCAATCTTTCAGCAGAGTTTTCACTGAGTTTTCTGATTTGGGTTTTGATTCATTCGGGTGGAAACTCACAACACCAAAGGAAATTGAATCGAAACATAGAAGAATGGAACGTTACGTGTCTCTCACGTTATCTCTTCATAGAGAAATTGATGAGCTTACACTATTGGAAAGCACGTTGAAAAAAGCACTTCTCAACAACAACAATAACAACAAGAACAGGAACAAAATCAGTGAGCTTGAAAACAAGATTTTGTGGCAGAAACAAGAGGTAAAGAATTTGAAAGAAAAATCTTTATGGAACAAAGGTTTTGATAATGTTGTTTTGTTATTAGCAAGGTTTGTTTTTACTTTGTTAGCAAGAATTAAGGTTGTTTTTGGAATTGGTAATGGCATTGGAAATGGAAATGGAGACAATTTACCTTATTTATGTCGAAGTTTATCAGCTTCTGCGAGTATTTACCCTTCTGATTATGAAAAAGATCAAAACTTTGTATCAGGGACGTTGAAATGTCATGTGTCTGTGTCCGAGTCCGTGCTTCATAGAAAAAGTTTGAAAATTGATGTTTATCCTTGTGATCATCAAAATGATCAAAACTTTGAATCTGGGTTGTTGAAAAGTTTGAAACTTGATGAGAAAAAAGTGGATTTAGGAAATGGGTTTTTTGAGTCAAACTGTGGAGTGTTGAAACCACCAAAAGGTAGTTTAGGTGATTCAGGTTTGTCTTTACATTATGCAAATTTGATTATTGTTATGGAAAAGATGATAAAATCACCTCAATTAGTTGGTGTTGATGCAAGAGATGATTTATATGCTATGTTACCAAATAGTATAAGATCATCATTGAGATTAAGGTTAAAAGGATCAATTGGATTTTGTGCTTGTGATCCTTTATTGGCTAATGAATGGAGAAATGCTTTGGGAAGGATACTTTGTTGGTTATTACCTTTGGCACAAAATATGATAAGGTGGCAAAGTGAAAGGAGTGTTGAAGAGAAGAGTTTGGTTCCTAAGAAATCAAATGTGTTGCTTTTGCAAACTTTGGTTTTTGCTGATAAGGTGATGACAGAAGCTGCTATCACTGAGTTACTTGTTGGTTTGAATTATGTTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTCAAGGTACCAATAATTTCAATGGATATTTGAGTTTGTACAAACCTAGCTAA 1548 0.3656 MALETLLTRFKTAFSNSFNTVQHKTTPSSNPNPKRIAVLAFEVAGVMSKLLHLWQSLSDAYIIRLQNDVVSLEGISKLISSDKSFLLKLAVAEFCDSLQLVANSVARFSQNCNDPSLQSFSRVFTEFSDLGFDSFGWKLTTPKEIESKHRRMERYVSLTLSLHREIDELTLLESTLKKALLNNNNNNKNRNKISELENKILWQKQEVKNLKEKSLWNKGFDNVVLLLARFVFTLLARIKVVFGIGNGIGNGNGDNLPYLCRSLSASASIYPSDYEKDQNFVSGTLKCHVSVSESVLHRKSLKIDVYPCDHQNDQNFESGLLKSLKLDEKKVDLGNGFFESNCGVLKPPKGSLGDSGLSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKGSIGFCACDPLLANEWRNALGRILCWLLPLAQNMIRWQSERSVEEKSLVPKKSNVLLLQTLVFADKVMTEAAITELLVGLNYVWRFEREMTAKALFQGTNNFNGYLSLYKPS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3106 515 PANTHER DUF3475 DOMAIN PROTEIN 1 514 - -
Mal6g3106 515 PANTHER BNAC09G50660D PROTEIN 1 514 - -
Mal6g3106 515 Coils Coil 193 213 - -
Mal6g3106 515 Pfam Domain of unknown function (DUF3475) 38 93 IPR021864 GO:0045927
Mal6g3106 515 Pfam Protein of unknown function (DUF668) 352 439 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3106 Mal-Chr6 89647928 89649475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3106 - - mtr:MTR_6g461910 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3106 6 89647928 89649475 Mal6g3106 6 89647928 89649475 ECH
Mal6g3106 6 89647928 89649475 Mal1g1152 1 14479965 14481410 PCT