Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3048 ATGGCGTGGTATAGAAGAGGAAAGCTTGTTCTTGATGGTTTTCATACCTTGGCTTCTAGGGTTTCATCTCAAACTTCAATTTTTCAACCTAGTAAGAGAATTTTGCCATCTGGGTATTTGAATTTGGGTTCCAAAAGTGCTAGCTTTAACGGGTTTTCTTCAATTTCTAATAGATTAAGTAAAAATGGCTTTGAGATTAATAAGAATATTGGGCTTGGTTCTAAAGGTGCTAGCTTTAATGGGTTTTCTTCGTTTTCTTCAATTTCTAATAGGTTAAGCAAAAATGGTTTTGAGATTAATAAGAATATTGGGTTTGGTTCTAAAGGTGCTAGCTTTAATGGGTTTTCTTCGTTTTCTTCGATTTGTAAGAGATTAGACAAAAGGGGTTTTGAGATTAATAAGAATATTGGGTTGGGTTGCAAAGGTGGTAGCTTTAATGGGTTTTCGTCGATTTCTAAGAATTTTAGGAGATTAGACAAAAGGGGTTTTGAAGTTAATAAGAATTTGAGGAGATTTTACTATGTTGATCCTCAAAATGTTCAGCATTTTAAGCCAAGAGGGCCAAGGAATTGGTTTCAGAATCCTAGGCATGTTTTGATTGGTGTGTTGGTTGGTTCAGGTGTTTTTATTACTGTGTATTTTGGGAATATGGAAACTGTTCCTTATACGAAGCGAACACATTTGATTTTGATGCCGAGAGAGATGGAAAGGAAGCTTGGGGAGAGGGAGTTTGAGAAGATGAAGGCAGGTTTTAAGGGGAAGTTGTTGCCTGCAATACATCCTGAAAGTGTGAGAGTGAGGATGATAGCGAATGATATTGTCGAGGCGTTGAAGAGAGGGTTGAGTAAGGAGAATGTGTGGACTGATTTAGATTATGCTTCAGAAAATACTGTGTTCGGTGAAGAAAGTGGGAAGGAGACAATTAGTGCATTGACTGAAAATGAAGGGAAAGTTGAAGGGAATTGGCACCGGGAAGATGAGGTTCTTGATGATAAATGGGTTCAGAAGAGTAGGAAGAAGGGTCAGGAACGAGGGTCGCAACCTGATACGTCGCATTTGGATGGATTGAATTGGGAGATTTTGGTGGTGAATGAGCCTATGGTTAATGCCTTTTGCTTACCTGGTGGGAAGATAGTTGTATTTACGGGTTTGCTTGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGGACATGCTGTGGCCAGACACAGCGCTGAGGGGATGACAAAGAATATGTGGTTTTTAATTCTAAACTTGATACTTTATCAATTTGTCACGCCTGATATTGTCAACACAATGTCATCACTTTTCTTACGGCTACCTTTCTCCAGAAGGATGGAAATTGAAGCTGATTATATTGGTCTTCTATTAATTGCATCGGCCGGCTATGATCCACGCGTGGCACCTAAAGTCTACGAGAAGTTGGGAAAAGTCACCGGCGATTCTACGCTTTTAGATTATTTCGCTACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTCAGGTGATGGATGAAGCTCTTAGTATATATAAGAATGTAAGAGCTGGACGTGGTGTTGAAGGATTTCTTTAG 1602 0.3933 MAWYRRGKLVLDGFHTLASRVSSQTSIFQPSKRILPSGYLNLGSKSASFNGFSSISNRLSKNGFEINKNIGLGSKGASFNGFSSFSSISNRLSKNGFEINKNIGFGSKGASFNGFSSFSSICKRLDKRGFEINKNIGLGCKGGSFNGFSSISKNFRRLDKRGFEVNKNLRRFYYVDPQNVQHFKPRGPRNWFQNPRHVLIGVLVGSGVFITVYFGNMETVPYTKRTHLILMPREMERKLGEREFEKMKAGFKGKLLPAIHPESVRVRMIANDIVEALKRGLSKENVWTDLDYASENTVFGEESGKETISALTENEGKVEGNWHREDEVLDDKWVQKSRKKGQERGSQPDTSHLDGLNWEILVVNEPMVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAEGMTKNMWFLILNLILYQFVTPDIVNTMSSLFLRLPFSRRMEIEADYIGLLLIASAGYDPRVAPKVYEKLGKVTGDSTLLDYFATHPSGRKRAELLAQAQVMDEALSIYKNVRAGRGVEGFL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3048 533 Pfam Peptidase family M48 355 508 IPR001915 GO:0004222|GO:0006508
Mal6g3048 533 Gene3D Metalloproteases ("zincins"), catalytic domain 350 414 - -
Mal6g3048 533 CDD M48C_Oma1_like 344 516 - -
Mal6g3048 533 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 170 525 - -
Mal6g3048 533 PANTHER METALLOENDOPEPTIDASE OMA1 170 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3048 Mal-Chr6 86243901 86248642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3048 K23010 - gmx:100799127 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3048 6 86243901 86248642 Mal6g3048 6 86243901 86248642 ECH