Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3015 ATGGCTATAGAGTGCATAAAAAGTACAAAACTCATGACTCAACAATCAAAACAAAACCATTGTAAAAATGAAGATGAAGAATCATTAGTTTTTGATGCTTCATTTCTAAGGCACTCCCTTAACCTTCCAAAACAATTCATTTGGCCAGATGAAGAGAAACCTTGCATGAATGTACCTGAACTTGATGTTCCACTCATTGATTTAAAAAATTTTCTTTCTGGTGACCCTTTTGCTGCAATGGAAGCTTCTAAAATCATTGGTGAAGCATGTGAAAAACATGGTTTTTTTCTTGTTGTTAATCATGGTATTGATGCTAAGTTAATACAACATGCTCATAGTTACATGGATGGTTTCTTTGAGAATCCCCTGTCTCAAAAACAGAGGATTCAGAGGAAAACAGGGGAACATTGTGGTTATGCTAGTAGTTTCACTGGAAGATTCTCCTCAAAACTTCCATGGAAAGAAACACTTTCTTTTCAATTTTCAGATGAGAAAGACTCACAAAATATTGTTAAAGACTACCTTTTCAACAATTTAGGAGAAGATTTTGAGCAATTTGGGGAGGTTTACCAAAAGTATTGTGAAGAAATGAGTACACTTTCTTTGGGGATAATGGAACTTCTTGGAATGAGCCTTGGAGTTGGAAAAGATTGTTTTAGAGATTTTTTTGAAGAGAATAAATCAATAATGAGGCTTAATTATTACCCTCCATGTCAAAAACCTGATCTCACATTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTACACCAAGACCAAGTTGGTGGCTTGCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAGGCCAAATTTCAATGCTTTTGTTGTCAATATTGGTGACACCTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTACATAGGGCAGTGGTGAACAACAAGACAACAAGAAAATCTCTAGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTGGTTTGTCCACCAAGTGAATTGGTGAGTGATTTGACACCAAGGATCTATCCAGATTTTACATGGCCTATGCTTCTTGAGTTTACTCAAAAGCATTATAGAGCTGATATGAGAACACTTGAGGCATTTACAAAATGGATTCAACAAAAAAGGACCTAA 1146 0.3586 MAIECIKSTKLMTQQSKQNHCKNEDEESLVFDASFLRHSLNLPKQFIWPDEEKPCMNVPELDVPLIDLKNFLSGDPFAAMEASKIIGEACEKHGFFLVVNHGIDAKLIQHAHSYMDGFFENPLSQKQRIQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKDSQNIVKDYLFNNLGEDFEQFGEVYQKYCEEMSTLSLGIMELLGMSLGVGKDCFRDFFEENKSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSIRPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNNKTTRKSLAFFLCPKGDKVVCPPSELVSDLTPRIYPDFTWPMLLEFTQKHYRADMRTLEAFTKWIQQKRT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3015 381 Gene3D - 35 363 IPR027443 -
Mal6g3015 381 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 226 325 IPR005123 -
Mal6g3015 381 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 378 - -
Mal6g3015 381 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 378 - -
Mal6g3015 381 Pfam 2OG-Fe(II) oxygenase superfamily 228 325 IPR044861 -
Mal6g3015 381 PRINTS Isopenicillin N synthase signature 250 271 - -
Mal6g3015 381 PRINTS Isopenicillin N synthase signature 86 103 - -
Mal6g3015 381 PRINTS Isopenicillin N synthase signature 285 311 - -
Mal6g3015 381 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 168 IPR026992 -
Mal6g3015 381 SUPERFAMILY Clavaminate synthase-like 39 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3015 Mal-Chr6 84240985 84242503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3015 42 366 Glycosyltransferase AT5G59530 28.869 4.27e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3015 K05282 - gmx:100305378 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3015 6 84240985 84242503 Mal6g3015 6 84240985 84242503 ECH
Mal6g3015 6 84240985 84242503 Mal1g0821 1 9829692 9831552 PCT