Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2862 ATGGCTGACGACGACTACAATGACTTGGACATCGGATATGAAGATGAGCCACCAGAGCCTGAGATTGAAGAAGGTGCAGAGGAGGATGCGGATGACAACGACAACAATGATGAGATGACTGGAGAGCCTATTGAAACTGAGGAAAAAGAAGAACAAGAACCAACGGAAAGGCCTCGAAAGACATCGAAATATATGACCAAGTATGAGCGTGCACGGATTTTGGGTACCCGTGCTCTTCAAATCAGTATGAATGCACCTGTCATGGTTGAGTTGGAAGGGGAGACTGACCCGCTAGAGATTGCCATGAAAGAGCTTCGAGAGAAAAAGATACCCTTTACCATCCGTCGTTACTTGCCTGATGGAAGCTATGAAGATTGGGGAGTTGATGAACTGATTGTGGAAGACTCATGGAAGAGGCAAGTTGGTGGTGATTGA 435 0.4644 MADDDYNDLDIGYEDEPPEPEIEEGAEEDADDNDNNDEMTGEPIETEEKEEQEPTERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELREKKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2862 144 PANTHER DNA-DIRECTED RNA POLYMERASES II AND V SUBUNIT 6B 1 144 - -
Mal6g2862 144 SMART RNA_pol_Rpb6_2 59 112 IPR006110 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 Hamap DNA-directed RNA polymerase subunit Rpo6 [rpo6]. 63 118 IPR006111 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 ProSitePatterns RNA polymerases K / 14 to 18 Kd subunits signature. 66 80 IPR020708 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 SUPERFAMILY RPB6/omega subunit-like 1 134 IPR036161 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 PIRSF RPB6 1 135 IPR028363 GO:0003899|GO:0005634|GO:0005665|GO:0006351
Mal6g2862 144 Gene3D - 3 135 IPR036161 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 MobiDBLite consensus disorder prediction 1 64 - -
Mal6g2862 144 Pfam RNA polymerase Rpb6 61 112 IPR006110 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 MobiDBLite consensus disorder prediction 1 49 - -
Mal6g2862 144 PIRSF RpoK/RPB6 1 135 IPR006111 GO:0003677|GO:0003899|GO:0006351
Mal6g2862 144 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 1 144 - -
Mal6g2862 144 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2862 Mal-Chr6 76307014 76310385 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2862 K03014 - pop:7484401 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2862 6 76307014 76310385 Mal6g2862 6 76307014 76310385 ECH