Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2648 ATGGCATCTTCTCGATCACCTATATCTGCTACATCATCAATTCCAAGACACCGAAATTCACCTCCTTCTGTACTAAACACAAGAGCTATGTCCAAAGATCTTTATTTCAACCATGATGGTGCAACCACAAAGAAGCTTCTTGCAGGGGTTGACTTAGTGGCAGAGCTGCTTGGTGTTACATTGGGTCCTAAGGGGAGAAATGTTGTGTTGCATAACAAGTATGGCCCACCAAGGATAGTAAATGATGGAGTAACTGTTCTCAAAGAGATTGAATTGGAAGATCCATTGGAGAATGTTGGAGTTAAATTGGTGAGGCAAGCTGGTGCAAAAACCAATATATTAGTTGGTGATGGCTCAACTACATCTGTTGTTCTTGCTCAAGGTTTAATCAAAGAGGGAATGAAGGTTATTGCAGCTGGAATGAATCCTGTCCAAATTGCGCGTGGGATTGAGAAAACAGCAGTAGCACTTGTTACTGAACTTAGTTTGATGTCTAGAGAAGTTGAGGATCATGAGCTTAAGGATGTTGCAGCAGTCAGCGCAGGGAACGATTATGTAGTCGGAAACATGATTTCTGAGGCTTTGCATAAAGTAGGAAGAAAAGGAGTTGTGACAATTGAAAAAGGAAAAAGCATTGAGAATAGTCTAGAGATTGTAGAAGGAATGCAATTCGATCGCGGATATCTGTCTCCGTACTTTGTCACAGATCGAAGAAAGATGACAGTTGATCTTCAGAACTGCAAGTTGCTTTTAGTTGACAAAAAGATCACAAATCCAAAGGAGTTGCTTAACATATTGAATAGTGCAGTGAAAGAGAAGTATCCAATTTTGATAGTTGCAGAGGGAATTGAACAGGATGCTCTTGCTCCAATTATTAAAAATAAACTTAGGGGTGTGCTTAAGGTTGCTGCTATTAAGGCTCCTGCTTTTGGGGAACGCAAGACTCACTACTTAGAGGATATTGCCATCTTGACTGGAGGTACTGTAATACGAGAAGATATGGGTTTCACCTTAGAAAAAGCTAGCAAGGATGTGCTTGGTTTTGCTATCAAAGTTATCATTACAAAAGATTCTACCCTACTAGTCACTGATGGGAGTACTCGAGAAGAAGTTGAAAAGAGGGTTAATCAACTTAAGAGCCTTGTTGAGAATACTGAAGAAAATTTTCAAAAGAAGATATTGAATGAAAGGATAGCAAGATTATCAGGGGGCATTGCCATTCTTCAGGTAGGAGCACAAACACAAGTAGAGTTGAAGGATAAACAATTAAGAGTAGAAGATGCCTTAAATGCAACCAAGGCAGCAATTGAGGAAGGTGTAGTAGTTGGTGGTGGCTGTAGCCTTTTAAGGCTATCCAAGAAGGTGGATGGCATAAAAATTCTCCTGGACAATGAAGAGCAAAAGATTGGAGCTGAAATCTTCAAAAGAGCTTTGAGCTATCCTACTAAAATGATAGCGAAAAATGCCGGTGTAAATGGCAACGTTGTCATAGATAAGGTTCTAGCAGATGATAACATGAATTTTGGTTACAATGCTGCTAGAGACTGTTATGAGGATCTCATGAAGGCTAGAATCATGGATCCAGCAAAGGTAGTTAGGTGTTGTATAGAGCATGCAGCTTCTGTGGCCAAGACATTTCTAACATCAAATGCTGTTGTGATTGACCGCATGGAACTAGAACGACCACTGCCACGTAGAAAGCCCATGCCTATGCCCAGAAAGCCCATGGCTATGCCAAGAATTCCCATGCCTAATTCAGATTCTTCACCAGTGCCTGATGACAGTTCCACGGAGTCGTTGAACGAAGTTCTCTGCGCTTGGGATGCGTTTCTTCTAGCCACTGACGATGTTGATGTGCCTCCGACAAATGTCGTTAATGGAGGAAATGTGGATCTATCACACGGAACAACACATGAGCTTATCGACAAGCCAAGATCATTGGGTGAAAGCAAAGCTGTTGTCGAAAGCTATTTCGATTTGTGGAGTTTCAATGGAGTTTCAAAACCGAATTTTGAAATTGAGATGAAGGATACTCCAGGTTTTGCAATTCGCCAGACTCATTCCACGGAATCGATCATGACGCATGCCTTCCCTAACGAAGACTCTGAAAAGTTAAACATGTCGCAAGGAGATACAATCAAGGACGATGGAGTTAGGAATCAAGGTTTGTCTCTACACAACAAAATTCCTGTGGCATTTCATTTTGCAAGTTTGGTGCATAATCAAGCTAGCAGTAGGAAACCTAAGTTTCGATTGCATTGGAATGATCTTGTGGCTGCGATCAAGGCGTTGCCATGGTTAGGGTATGTCAAGGTAGAGCTTGATATCTCACAAATTTCACATGACTCTAGGCTTGTCTCTCCAGGCTCTAACGAGGTTCTGATTTGTGGCAATATACATAGAATGGTTGTGCCTGCTAAGTGTTTGATGAAATTTCTGAAGAATTTGAACAATGTTGGCACTGTTTTAGATAATGGTAGCATTCCCACCTTGGTGAGTAAGTGTGAGGTGTTGAGAAATATTGTTGGTGTTAAGGAAGTACATGGGGTAATGGGTGAGGAAAGTCTTGTGTCTCTGTTCATTAAATTTTTTAAATCCAATGGTGAAGCATTCAGCTACTATACTCTGTTACAATGGGAGATGTTTCAATTCAAGAGTTTGATATGA 2667 0.4091 MASSRSPISATSSIPRHRNSPPSVLNTRAMSKDLYFNHDGATTKKLLAGVDLVAELLGVTLGPKGRNVVLHNKYGPPRIVNDGVTVLKEIELEDPLENVGVKLVRQAGAKTNILVGDGSTTSVVLAQGLIKEGMKVIAAGMNPVQIARGIEKTAVALVTELSLMSREVEDHELKDVAAVSAGNDYVVGNMISEALHKVGRKGVVTIEKGKSIENSLEIVEGMQFDRGYLSPYFVTDRRKMTVDLQNCKLLLVDKKITNPKELLNILNSAVKEKYPILIVAEGIEQDALAPIIKNKLRGVLKVAAIKAPAFGERKTHYLEDIAILTGGTVIREDMGFTLEKASKDVLGFAIKVIITKDSTLLVTDGSTREEVEKRVNQLKSLVENTEENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQLRVEDALNATKAAIEEGVVVGGGCSLLRLSKKVDGIKILLDNEEQKIGAEIFKRALSYPTKMIAKNAGVNGNVVIDKVLADDNMNFGYNAARDCYEDLMKARIMDPAKVVRCCIEHAASVAKTFLTSNAVVIDRMELERPLPRRKPMPMPRKPMAMPRIPMPNSDSSPVPDDSSTESLNEVLCAWDAFLLATDDVDVPPTNVVNGGNVDLSHGTTHELIDKPRSLGESKAVVESYFDLWSFNGVSKPNFEIEMKDTPGFAIRQTHSTESIMTHAFPNEDSEKLNMSQGDTIKDDGVRNQGLSLHNKIPVAFHFASLVHNQASSRKPKFRLHWNDLVAAIKALPWLGYVKVELDISQISHDSRLVSPGSNEVLICGNIHRMVVPAKCLMKFLKNLNNVGTVLDNGSIPTLVSKCEVLRNIVGVKEVHGVMGEESLVSLFIKFFKSNGEAFSYYTLLQWEMFQFKSLI* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2648 888 Gene3D - 167 439 IPR027410 -
Mal6g2648 888 MobiDBLite consensus disorder prediction 1 25 - -
Mal6g2648 888 Gene3D - 42 553 IPR027413 -
Mal6g2648 888 PANTHER CHAPERONIN 60 SUBUNIT BETA 4, CHLOROPLASTIC 6 564 - -
Mal6g2648 888 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 6 564 - -
Mal6g2648 888 Pfam TCP-1/cpn60 chaperonin family 53 555 IPR002423 GO:0005524
Mal6g2648 888 SUPERFAMILY GroEL apical domain-like 213 405 IPR027409 -
Mal6g2648 888 SUPERFAMILY GroEL equatorial domain-like 42 553 IPR027413 -
Mal6g2648 888 CDD GroEL 32 555 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 Gene3D GroEL 221 402 IPR027409 -
Mal6g2648 888 TIGRFAM GroEL: chaperonin GroL 32 557 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 SUPERFAMILY GroEL-intermediate domain like 171 225 IPR027410 -
Mal6g2648 888 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 PRINTS 60kDa chaperonin signature 297 320 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 PRINTS 60kDa chaperonin signature 379 404 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 PRINTS 60kDa chaperonin signature 427 448 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Mal6g2648 888 MobiDBLite consensus disorder prediction 563 597 - -
Mal6g2648 888 ProSitePatterns Chaperonins cpn60 signature. 434 445 IPR018370 GO:0005524|GO:0006457
Mal6g2648 888 Coils Coil 368 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2648 Mal-Chr6 66484590 66494631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2648 K04077 - gmx:100785937 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2648 6 66484590 66494631 Mal6g2648 6 66484590 66494631 ECH