Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2278 ATGTCTTCATCTCCGTCTTGTTCCGCCGTTGACGACGGTCTCATGCGCAACCGCATCCTCTCTACCAAGCTCTACTTCGACGTACCAACGTCCAAAGTTCCGCTTATCTACTCCGATTCTTACGACATATCCTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCTAAATGGGGACGAATTTGTAAGTTTCTTATTTCTTTTGGTGTTTTGGATAAAAATCACATTGTTGAACCACTTGAAGCTTCTCAAGATGACCTTCTAGTGGTACACTCAGAATCATACTTGAATAGTCTGAAGGAAAGTTCGAATGTTGCCAAGATAATTGAGGTCCCTCCCGTGGCAATGTTTCCCAATTGTCTTGTACAACTTAAAGTTCTTTTCCCATTTAGGAAACAGGTTGGGGGAACTATATTGGCTGCAAAACTTGCAAAGGAAAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGTTCTGCGGAAAATGGAGGTGGATTTTGTGCTTATGCAGATATTTCTCTATGCATCCACTTCGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTTGCCGATGATAACCGAGTCTACATTCTGGATATGTATAACCCTGGAATATATCCTTTGGATTATGAGGCAAGAAACTACATAAATCAGAAAGTTGAAGTGAAGAGCGGGACTCATACAGAAGAGTACCTGCAGAAATTAGATGAAGCACTTGAGGTTGCTGGGCGAAGGTTTAACCCTGAGCTGTTAGTTTATAATGCTGGAACTGACATCCTAGAAGGTGATCCATTAGGAAGGTTGAAGATTAGTCCTGATGGAATTGCTCTTAGAGATGAGAAAGTATTTCGGTTTGCTCGCGAGAAGAACATTCCTATTGTCATGCTCACTTCAGGTGGATACATGAAGTCCAGTGCTAGGGTCATTGCAGATTCAATTCTCAATCTAGAGAAGAAATGCTTGATAGAAACCAGTGGAGGTCCAAAGGCTGCATAA 1053 0.4169 MSSSPSCSAVDDGLMRNRILSTKLYFDVPTSKVPLIYSDSYDISFLGIEKLHPFDSSKWGRICKFLISFGVLDKNHIVEPLEASQDDLLVVHSESYLNSLKESSNVAKIIEVPPVAMFPNCLVQLKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTHTEEYLQKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSILNLEKKCLIETSGGPKAA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2278 350 CDD HDAC_classIV 52 335 IPR044150 GO:0004407|GO:0016575
Mal6g2278 350 Pfam Histone deacetylase domain 52 333 IPR023801 -
Mal6g2278 350 Gene3D Histone deacetylase domain 32 344 IPR037138 -
Mal6g2278 350 PANTHER HISTONE DEACETYLASE 11 11 344 - -
Mal6g2278 350 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Mal6g2278 350 PRINTS Histone deacetylase superfamily signature 156 179 IPR000286 -
Mal6g2278 350 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Mal6g2278 350 PANTHER HISTONE DEACETYLASE 11 11 344 - -
Mal6g2278 350 SUPERFAMILY Arginase/deacetylase 30 334 IPR023696 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2278 K11418 - gmx:100781276 607.831