Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2259 ATGGAACGTGCAAGAAGACTCGCAAACCGTGCAACTCTGAAACGTCTTCTTTCAGAGGCAAAACAAAATCGAAAGAATGAATCAACAACAACAACACCACCTCTTCCATTTTCATCTTCATCAAGGTATGTTTCCTCTGTTTCAAACTCTGTTTTCAGAAACAGAGGATCGAACAATACCAACGTTTTTGGAAGGAACACCAATGTTTCACGTGGTGTTGGTGGATTTCACGGTGTTGGGTCTTCAACACAATCTCGATCCATCACTGTTGAAGCTTTGAAACCAAGTGACACATTCCCAAGACGCCATAACTCAGCTACACCAGAAGAACAAACAAAAATGGCTGAATCATGTGGTTTTGATAATCTTGATTCACTTGTTGATGCAACAGTTCCAAAATCAATCCGTTTGAAGGAAATGAAGTTTAACAAATTTGATGCAGGGTTAACAGAAGGTCAAATGATTGAACACATGAAGGATTTAGCATCAAAGAATAAGGTTTTCAAATCTTTCATTGGTATGGGATACTATAACACACATGTTCCACCAGTGATCTTGAGGAATATTATGGAGAATCCAGCTTGGTATACTCAGTATACACCTTATCAAGCTGAGATTTCGCAAGGTCGTCTTGAATCGTTGTTGAATTTTCAAACCATGATTACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGTACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTAAGAAGAAGACTTTTATTATTGCTAGTAATTGTCATCCACAAACTATTGATATTTGTAAGACAAGAGCTGATGGATTTGAGCTTAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAAGGTGAGGTTTTGGATTATGGTGAGTTTATTAAGAAGGCTCATGCTAGTGAGGTTAAGGTTGTTATGGCAAGTGATCTATTGGCATTGACTGTGTTGAAACCTCCTGGTGAGTTTGGAGCTGATATTGTTGTTGGTTCAGCTCAGAGATTTGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCACAAGAGTATAAGAGGATGATGCCTGGAAGAATCATTGGTGTTAGTGTTGATTCTTCTGGAAAGCCAGCTTTGAGGATGGCTATGCAAACTAGGGAGCAGCATATCCGTAGGGATAAGGCCACTAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTATATCATGGACCTGAAGGCCTTAAAGCCATTGCACAAAGGGTTCATGGTCTTGCTGGGGTATTTGCTTTGGGACTAAAGAAACTTGGAACAGTGGAAGTTCAGGATCATGGCTTCTTTGACACTGTCAAGGTTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTGTCAAAAGTGAAATCAATTTGAGAGTTGTAGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACTACATTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTCTCATTCACAGCTGCATCTCTTGCACCAGAATTTCAGAATGCAATTCCTTCTGGATTAGTTAGGGAGAGTCCTTATTTGACACACTCTATCTTTAACACGTACCAAACTGAGCACGAGTTGCTGAGATACATTCATAGGCTACAATCAAAAGATCTCTCACTTTGCCACAGTATGATCCCACTTGGATCCTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTACTGATATTCACCCTTTTGCACCAACTGAGCAGGCTCAAGGTTACCAGGAAATGTTCGACAATTTGGGTGACCTGCTGTGTACCATCACTGGATTTGATTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATTCGTGCATATCATATGTCAAGAGGTGACCACCACCGCAATGTTTGCATTATACCAGTCTCAGCGCATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACCATAGGAACTGATGCCAAGGGAAACATTAACATTGAAGAGTTGAAGAAGGCTGCTGAGACACACAAGGACAACTTATCTGCATTTATGGTTACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCCAGATTATCCATGATAATGGAGGCCAAGTATACATGGATGGTGCAAACATGAATGCACAGGTAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGAATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCCGTGGTGCCAACTGGTGGAATTCCTGCCCCTGAAAATGCTCAACCACTTGGTAGCATCTCAGCTGCACCATGGGGATCAGCACTCATATTGCCAATCTCTTACACATACATAGCCATGATGGGTTCTAAAGGACTCACTGACGCGTCAAAGATTGCCATTTTGAATGCAAACTACATGGCGAAACGATTGGAGAGTTATTACCCAGTTCTTTTCCGCGGAGTCAACGGAACATGTGCTCACGAGTTCATTATTGACTTGAGAGGCTTTAAGAACACTGCTGGGATAGAGCCTGAAGATGTTGCGAAACGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTGCCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTGGACAGGTTTTGTGATGCTCTCATTTCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAATGCTGACGTTCACAACAATGTTCTTAAGGGAGCTCCTCATCCACCATCGCTGCTCATGGCTGATGCATGGACAAAGCCATATTCCAGGGAATATGCAGCCTTCCCTGCTCCATGGCTCCGTGTTGCAAAGTTTTGGCCTACCAATGGACGTGTTGATAATGTGTATGGTGACCGCAACCTGATTTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAACAAGCTGCTGCCACAGCATAG 3180 0.4255 MERARRLANRATLKRLLSEAKQNRKNESTTTTPPLPFSSSSRYVSSVSNSVFRNRGSNNTNVFGRNTNVSRGVGGFHGVGSSTQSRSITVEALKPSDTFPRRHNSATPEEQTKMAESCGFDNLDSLVDATVPKSIRLKEMKFNKFDAGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHASEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGTVEVQDHGFFDTVKVKTSNAKAIADAAVKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEFQNAIPSGLVRESPYLTHSIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELKKAAETHKDNLSAFMVTYPSTHGVYEEGIDDICQIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENAQPLGSISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRVAKFWPTNGRVDNVYGDRNLICTLLPASQAVEEQAAATA* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2259 1059 Gene3D Aspartate Aminotransferase, domain 1 862 997 IPR015422 GO:0003824
Mal6g2259 1059 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1059 - -
Mal6g2259 1059 CDD GDC-P 571 966 IPR020581 GO:0004375|GO:0006546
Mal6g2259 1059 Pfam Glycine cleavage system P-protein 102 528 IPR020581 GO:0004375|GO:0006546
Mal6g2259 1059 Pfam Glycine cleavage system P-protein 545 821 IPR020581 GO:0004375|GO:0006546
Mal6g2259 1059 SUPERFAMILY PLP-dependent transferases 549 1044 IPR015424 -
Mal6g2259 1059 MobiDBLite consensus disorder prediction 23 43 - -
Mal6g2259 1059 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1059 IPR020581 GO:0004375|GO:0006546
Mal6g2259 1059 CDD GDC-P 151 528 IPR020581 GO:0004375|GO:0006546
Mal6g2259 1059 TIGRFAM gcvP: glycine dehydrogenase 102 1043 IPR003437 GO:0004375|GO:0006544
Mal6g2259 1059 MobiDBLite consensus disorder prediction 18 43 - -
Mal6g2259 1059 Gene3D Aspartate Aminotransferase, domain 1 171 524 IPR015422 GO:0003824
Mal6g2259 1059 SUPERFAMILY PLP-dependent transferases 102 528 IPR015424 -
Mal6g2259 1059 Gene3D - 610 861 IPR015421 GO:0003824
Mal6g2259 1059 Gene3D - 182 442 IPR015421 GO:0003824
Mal6g2259 1059 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 93 1050 IPR003437 GO:0004375|GO:0006544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2259 Mal-Chr6 52407606 52415213 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2259 K00281 - gmx:100819714 1920.98