Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2142 ATGTCTAGCTTCACTCATGCCACTACACTACTCCATGCTCACATCAAAACCAAACACAAAAACACATCCAACAACAACATTAACAACAACCCTTTATCTTCTAAACAAAATGTAACAAATAGAAGAAACTTAATTTCAACATTTCTAGCCACATCAATGGTTGGAGCAGTGCATGTTGCAACACCACCACTAGCACTAGCACAAAATTGGGGAACACGTTCTTTTCTAAAAGAACATTTTTTTGAGCCAGGGCTATCCCCTGAAGATGCAGTTTTAAGGATAAAACAAACAGCTGAAGGGTTACATAATCTTAGGGAAATGTTGGAAACTTTGTCTTGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAGGATTTGAAAAATGCTCTCACTACTTTGCCTGAAAATCGTCGCAAGGAATATGTCAAAACTGCTAATGAGTTGGTTGATAACTTGACTGAGATGGATCGTTATGTTCGGTCACCAAAGGTATATGAATCATACCTATACTACGAGAAGTCATTGAAATCAATAGATGAACTTGTGGCTCTGTTAGCATAG 576 0.3663 MSSFTHATTLLHAHIKTKHKNTSNNNINNNPLSSKQNVTNRRNLISTFLATSMVGAVHVATPPLALAQNWGTRSFLKEHFFEPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYVMFYIRLKQNYLEQDLKNALTTLPENRRKEYVKTANELVDNLTEMDRYVRSPKVYESYLYYEKSLKSIDELVALLA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2142 191 MobiDBLite consensus disorder prediction 20 36 - -
Mal6g2142 191 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 191 - -
Mal6g2142 191 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 67 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Mal6g2142 191 Gene3D - 54 190 IPR023222 -
Mal6g2142 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Mal6g2142 191 MobiDBLite consensus disorder prediction 16 36 - -
Mal6g2142 191 SUPERFAMILY Oxygen-evolving enhancer protein 3, 80 191 IPR023222 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2142 K08901 - gmx:100807480 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2142 6 50080656 50082414 Mal6g2142 6 50080656 50082414 ECH