Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1980 ATGAGGAAGAATGGATGGCAGCTACCTTACCACCCTCTTCAGGTGGTGGCTATTGCTGTTTTTTTGGCTCTTGGTTTTGCTTTCTATGTGTTCTTTGCTCCTTTTGTTGGGAAGAAGATTTATCAGTATATTGTTACAGGACTCTACACACCTCTGATTACTTGTGTCTTTGGACTGTACATTTGGTGTGCAGCAGCTGATCCAGCAGATCCAGGAGTTTTTAAGTCCAAAAAGTATCTCAAAATTCCAGACAGCAAAAAGCTTAGTGGATTCAAAGATTCTAAACTAGGAGGGGATTCAAATTCATCAGTGAATGATGGAAATGCTTCAACAATTGGACCAAAATCTGTGGATAAGGAAGCATTGGGAACTGAAGCAAGTTTAAAAGATGCTTCTATTTCAATAGAGAAGAGTGCATCACCGCCTTCACCATCCTGTTTTCTATGGCTTTTCTCTCCTTGTGCTTATATATGCAGCTGCTCTAGTTTCCACGAGCACTCTTCTGATCTACAAGCAAGTGAAGATGGCATGTTCTACTGCAGTTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAGCACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCATTGCAGATGGCTTAATAACTGTATTGGGAAAAAGAACTATCGAAATTTTTTCACCCTTATGGTTGCTGCTCTTCTCTTGCTTATTCTTCAATGGTTGACTGGGATAGTTGTGCTTATCTGCTGTTTTCTCAAGAGGAAGGAATTTTCCGTTGACGTATCCTCCAAGCTGGGGAGCAGTTTCTCGCTGGTTCCTTTTGTTATTGTGGTGGCGGTTTGCACGATTTTGGCTATGATTGCTACCTTACCCCTTGTTCAGCTTTTCTTCTTTCATATTCTTCTCATTAAAAAGGGAATCAGCACATATGATTACATCATAGCTTTGAGGGAGCAGGATCAGCAAGGAGTTGGAGGTCAGCAGAGTCCCCAAATGTCACCTGTTAGCTCAATTACTGGACTAAGCAGTGCAAGCTCCTTTTCTACTTTCCGTCGCGGTCAATGGTGCACACCCCCACGCATGTTCGTGGATGATCAGTTTGATGTAGTGCCACCAGAAACAGCTTCTGTAAGTTCGCTCGGAAAGAAGACTCTAAGAGAAGAACCGGTTAAGAAAAAGACTACAGGAGCAGTCAAAATTAGTCCGTGGACATTGGCACGGTTAAATGCAGAAGAGGTTTCAAGAGCCGCTGCAGAAGCAAGAAAAAAATCGAAAATTCTGCAGCCTGTAGTGAGACATAACAACGAGCCATTCAGGCTAGAAGCTGATCATAACTCCGGAAGCAGTGGACGAAGAATGGCCCCTAGGAGGCCAGGTAAACGGATACGCTTGCCTGCTGACTTACCTATGGAGGCCTTAACAAACTATTCTGCCGGTAATATCGACAAAGGCTTCAATGAAATGTCTAGTTTAGCCTCTCTCCAGCTTGAAGCGCGGACAAGTCAAGTTGTGTCAAGCTCAGGTGGCATTGTTGCATCTTCTCCGGAAAGCAGTTTAGATTCGCCTGATATCCACCCCTTTTGTGTGCCTCCGGCGGAAGGCGAATCCACAAGACGGGTTGCTGCAGGTCTTTCTGTTGCTGGTCCCGCGACTCTGAAGGGATTTCCGTTGTCAAGGTCAACTAGTGATGGGTATGATGCATCTGGTGGGGAAGACAGTGACAGGGTTCCTACAAGGATTGTGAATGTTCATAGATCAACAACAAATTGGAGTAATCTTCTTTTCAATGCTGATCAAGATGAGAGAGGTTATGAAACAAAATCATCATCTAGCCTTGCTCATAATAGAAAGTTGTGA 1851 0.4381 MRKNGWQLPYHPLQVVAIAVFLALGFAFYVFFAPFVGKKIYQYIVTGLYTPLITCVFGLYIWCAAADPADPGVFKSKKYLKIPDSKKLSGFKDSKLGGDSNSSVNDGNASTIGPKSVDKEALGTEASLKDASISIEKSASPPSPSCFLWLFSPCAYICSCSSFHEHSSDLQASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKKNYRNFFTLMVAALLLLILQWLTGIVVLICCFLKRKEFSVDVSSKLGSSFSLVPFVIVVAVCTILAMIATLPLVQLFFFHILLIKKGISTYDYIIALREQDQQGVGGQQSPQMSPVSSITGLSSASSFSTFRRGQWCTPPRMFVDDQFDVVPPETASVSSLGKKTLREEPVKKKTTGAVKISPWTLARLNAEEVSRAAAEARKKSKILQPVVRHNNEPFRLEADHNSGSSGRRMAPRRPGKRIRLPADLPMEALTNYSAGNIDKGFNEMSSLASLQLEARTSQVVSSSGGIVASSPESSLDSPDIHPFCVPPAEGESTRRVAAGLSVAGPATLKGFPLSRSTSDGYDASGGEDSDRVPTRIVNVHRSTTNWSNLLFNADQDERGYETKSSSSLAHNRKL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1980 616 Pfam DHHC palmitoyltransferase 178 311 IPR001594 GO:0016409
Mal6g1980 616 PANTHER S-ACYLTRANSFERASE 8 518 - -
Mal6g1980 616 ProSiteProfiles DHHC domain profile. 178 228 - -
Mal6g1980 616 MobiDBLite consensus disorder prediction 553 575 - -
Mal6g1980 616 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1980 Mal-Chr6 42952126 42958101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1980 171 309 Lipid Metabolism Gene Families AT4G22750 28.859 2.14e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1980 K20027 - gmx:100803007 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1980 6 42952126 42958101 Mal6g1980 6 42952126 42958101 ECH