Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1904 ATGGCACATGAACAAGAGGTCAGAACAAGCACCCCGCTTTCAAAATGTGACACCTACTTCGAAACTATACAATCCAGAAAGAAACTACCACAGACATTGCAGGAAACATTGACAGATTCATTTGCAAAGATTCCTGTTTCTTCTTTTCCAGGAGTTCCTGGAGGAAAAGTGATTGAAATTCTAGCAGACACACCTGTTGGTGAAGCGGTTAAGATTCTATCAGAAAGCAACATCTTAGCAGCACCAGTTAAAGACCCTGATGCAGGAATTGGTTCAGATTGGAGAGATAGGTACCTTGGGATCATAGATTATTCAGCTATCATTCTCTGGGTGATGGAGAGTGCAGAACTTGCTGCAGTTGCTCTATCTGCTGGTACAGCAACGGCAGCTGGAGTTGGAGCGGGAACTGTCGGTGCTTTGGGAGCAATAGCATTAGGAGTTACAGGTCCTGCTGCAATTGCTGGGCTTACTGCTGCTGCAGTAGGTGCAGCAGTGGTAGGTGGTGTTGCTGCAGATAAAACCATGGCTAAAGATGCTCCTCAAGCTGCAAATAACCTCGGTGAGGACTTTTACAAAGTAATACTACAAGAAGAACCCTTCAAGTCAACAACGGTGCGATCTATACTTAAATCATACCGATGGGCACCCTTTGTTCCAGTTGCAAAAAATAGTGCAATGTTGACTGTCTTGCTGCTTCTCTCAAAGTATAGGCTGAGGAATGTACCGGTGATAGAACCAGGTAAACCAGACATTGTAAACTTCATTACTCAGTCTGCAGTTATCCAAGGTCTTGAAGGATGCAGAGGAAGAGATTGGTTTGATTGCATTGCAGCCAGGCCTATATCTGATCTTGGACTTCCTTTTATGTCTGCTGATAAGGTTATTAGCATCCAGAGTAATGAATTGATTCTTGAAGCTTTCAAGATTATGAGAGATAATCAAATTGGTGGTCTTCCAGTAGTAGAGGGGCCAGCGAAGACAATTGTTGGAAACTTGAGCATAAGAGATATCAGATACTTGCTGCTAAAGCCTGAAATTTTCTCCAATTTCAGGAATCTCACTGTGATGGATTTCATGAAGAAAATTGTCTCAGCATCCTATGAATCTGGAAAAGTTACTCGGCCTATAACATGCAAGCCTGACGCAACTATGCAGAGCGTGATTCACACTCTTGCTTCACAGTCTATTCACAGGATTTATACAGTAAATGGACAAGATCAAGTAGTTGGTGTCATCACACTGAGAGATGTAATCTCTTGTTTCATCACCGAACCAGATTACCATTTCGATGATTACTACGGATTTGCAGTTAAAGAGATGTTGAATCACTGA 1332 0.4249 MAHEQEVRTSTPLSKCDTYFETIQSRKKLPQTLQETLTDSFAKIPVSSFPGVPGGKVIEILADTPVGEAVKILSESNILAAPVKDPDAGIGSDWRDRYLGIIDYSAIILWVMESAELAAVALSAGTATAAGVGAGTVGALGAIALGVTGPAAIAGLTAAAVGAAVVGGVAADKTMAKDAPQAANNLGEDFYKVILQEEPFKSTTVRSILKSYRWAPFVPVAKNSAMLTVLLLLSKYRLRNVPVIEPGKPDIVNFITQSAVIQGLEGCRGRDWFDCIAARPISDLGLPFMSADKVISIQSNELILEAFKIMRDNQIGGLPVVEGPAKTIVGNLSIRDIRYLLLKPEIFSNFRNLTVMDFMKKIVSASYESGKVTRPITCKPDATMQSVIHTLASQSIHRIYTVNGQDQVVGVITLRDVISCFITEPDYHFDDYYGFAVKEMLNH* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1904 443 SUPERFAMILY CBS-domain pair 37 262 IPR046342 -
Mal6g1904 443 Pfam CBS domain 373 419 IPR000644 -
Mal6g1904 443 Pfam CBS domain 292 342 IPR000644 -
Mal6g1904 443 ProSiteProfiles CBS domain profile. 371 431 IPR000644 -
Mal6g1904 443 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Mal6g1904 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 442 - -
Mal6g1904 443 CDD CBS_pair_SF 292 418 - -
Mal6g1904 443 SUPERFAMILY CBS-domain pair 277 430 IPR046342 -
Mal6g1904 443 SMART cbs_1 374 422 IPR000644 -
Mal6g1904 443 SMART cbs_1 293 342 IPR000644 -
Mal6g1904 443 SMART cbs_1 56 112 IPR000644 -
Mal6g1904 443 SMART cbs_1 216 265 IPR000644 -
Mal6g1904 443 Gene3D - 52 267 IPR046342 -
Mal6g1904 443 Gene3D - 276 424 IPR046342 -
Mal6g1904 443 CDD CBS_pair_SF 56 113 - -
Mal6g1904 443 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Mal6g1904 443 PANTHER BNAANNG38820D PROTEIN 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1904 Mal-Chr6 40330628 40333124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1904 - - gmx:100800376 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1904 6 40330628 40333124 Mal6g1904 6 40330628 40333124 ECH