Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1888 ATGGCATTCAAGATCAAGAACACACATTCTTTCCACCTCCACCACCTCACAACAACAATCATCATCTTCATCATCATCATCATCTTCAACAAATCCCAAACCACCAATGCACAACAACAACAACAACAACAAAACCCCATAACTACAATAAACACACTAGGTCACTGGATTCAGCTCAAAAAAACCATAGGCATCTCAGCCATGCACATGCAAGTAATGAAAGACAACAAAGTAATCATCTTCGACCGAACCGATTTCGGTCCATCAAACATCTCTCTCTCCAACAACCATTGCCGTTACAATCCCCACGACATGGCTCTCAAAATCGACTGCACCGCTCACTCCATCCTCTACGACATTCCCACAAACACCCTCCGTCCTTTAACTCTCCAAACCGACGCTTGGTGTTCCTCCGGCGCTGTCTCCCCTACCGGAACCCTAATCCAAACCGGCGGCTTCAACGACGGTTACAACAAACTCCGAACCTTCACACCTTGTCCTCACAACAACACATGTGACTGGGAAGAGCTTCAACAGAATCTTTCTTCAAGTCGTTGGTATGCTTCGAATCAGATTCTCCCCGACGGTAGAATCATCGTCGTTGGTGGTCGTTCATCTTTCTCATATGAATTCGTACCGAAGAGATTAAACGACGCGTCGTTTTACTTTCTTCGTTTCTTGCAACTCACGCGAGATTCGAATCAAGGTGAAGAGAATAATCTTTACCCTTTCTTGCATCTTTTACCGACGGGGAATCTTTTCATTTTTGCGAACCGTCGTTCTATTTTGTTTGATTATCAACGGAATAGGGTAATTCGGGAATTTCCTATTATACCTGGTGAAGAGAAGAGAAATTATCCAAGTACAGGCTCTTCTGTTATGTTGCCGTTAAATTTAACGGGAAAAAATGGGACGGAGTTTATTGAGGTTGAGATTATGGTTTGCGGCGGCGCGTTTCCCGGCGCGTTTGATTATGCTAGTAAAAAGAAGGTGTTTCTAGAAGCTTCTAGTAGTTGTGGGAGGTTGAAGGTTAGTGACGTGGAACCGGAGTGGGTTATGGAGGTTATGCCAGTGCCACGTGTCATGCCGGATATGATACTTTTACCGACGGGGAATGTGGTTATTTTGAACGGTGCGGCGAATGGTACGGCGGGTTGGGAAAACGCGGCGAACCCGGTTTTGTATCCGGTTTTATATCGACCCGAGTTGGTTAACCCGTTTTTGAGATTTGAGTTGTTAGCACCAGCGAGTACACCAAGGATGTATCATTCATCAGCTGTGTTGTTGCCAGATGGCAGGATTTTAGTGGGTGGGAGTAACCCACATCGGCTTTATGATTTTCAGGCGTACCCGTATCCGACCGAGTTGAGTTTGGATGCGTATTATCCAGATTATCTTCTGCCGGAGTTGGGTACGTTGCGGCCTGTAATTCTTGCGGTGGAGGCTGTTAATAATACGACGTCGTATGAGAGTTTGTTTTCGGTGTCATTTTTGTTGAGGGAGGCAAGGGAGGTTAATCGGATACGTGTTTCGTTGGTGGCGCCATCGTTTACTACTCACTCGTTCGCGATGAATCAACGGTTGTTGTTTTTAGAAGTTACGGCATTGGAGGAGGTTGTGAATTCCATGCAAGGTAAAAATTTTGGTGAGTTTGGTCTCGGAAGCTCATTAGGACCCGGAAAGATTGCGAATTCGGTTTATAAGGCTACGGTTCGTGGGCCCCCATCTCTTAATGTGGCCCCACCTGGGTATTATATGCTTCATGTTGTCCATGCTGGAATTCCTAGCGTTGCTACTTGGGTTCATGTTCACTGA 1815 0.4579 MAFKIKNTHSFHLHHLTTTIIIFIIIIIFNKSQTTNAQQQQQQQNPITTINTLGHWIQLKKTIGISAMHMQVMKDNKVIIFDRTDFGPSNISLSNNHCRYNPHDMALKIDCTAHSILYDIPTNTLRPLTLQTDAWCSSGAVSPTGTLIQTGGFNDGYNKLRTFTPCPHNNTCDWEELQQNLSSSRWYASNQILPDGRIIVVGGRSSFSYEFVPKRLNDASFYFLRFLQLTRDSNQGEENNLYPFLHLLPTGNLFIFANRRSILFDYQRNRVIREFPIIPGEEKRNYPSTGSSVMLPLNLTGKNGTEFIEVEIMVCGGAFPGAFDYASKKKVFLEASSSCGRLKVSDVEPEWVMEVMPVPRVMPDMILLPTGNVVILNGAANGTAGWENAANPVLYPVLYRPELVNPFLRFELLAPASTPRMYHSSAVLLPDGRILVGGSNPHRLYDFQAYPYPTELSLDAYYPDYLLPELGTLRPVILAVEAVNNTTSYESLFSVSFLLREAREVNRIRVSLVAPSFTTHSFAMNQRLLFLEVTALEEVVNSMQGKNFGEFGLGSSLGPGKIANSVYKATVRGPPSLNVAPPGYYMLHVVHAGIPSVATWVHVH* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1888 604 SUPERFAMILY E set domains 471 603 IPR014756 -
Mal6g1888 604 SUPERFAMILY Galactose oxidase, central domain 115 467 IPR011043 -
Mal6g1888 604 CDD E_set_GO_C 474 603 IPR015202 -
Mal6g1888 604 Pfam Galactose oxidase-like, Early set domain 474 603 IPR015202 -
Mal6g1888 604 PANTHER F14L17.20 PROTEIN 20 603 - -
Mal6g1888 604 PANTHER SECRETED PROTEIN-RELATED 20 603 - -
Mal6g1888 604 Pfam Glyoxal oxidase N-terminus 68 317 IPR009880 -
Mal6g1888 604 Gene3D - 50 473 IPR037293 -
Mal6g1888 604 Gene3D Immunoglobulins 474 604 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1888 Mal-Chr6 39706829 39708643 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1888 - - mtr:MTR_5g038410 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1888 6 39706829 39708643 Mal6g1888 6 39706829 39708643 ECH