Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1863 ATGGAGGAAAGTGAACAAGTGAAAACTGAGGAGGAGAAAAAGGAAAGAGTATGGAGTTGGGGTGCTGGAACAGATGGTCAATTAGGAACAGCTAAGCTTCAAGATGAACATATCCCTCAACAAATCTCTCTATCTTCCTTTGTCTCCTCACTTGCTTGTGGCGGCGCTCATGTCATCGCCTTAATCTCTGCTGGGAAGGTATTGTCGTGGGGTAGGGGCAATAGTGGTCAACTAGGCCATGGAGAGGTTGTCAATAACATGTTGTATCCCAAGGCTGTAACATCATTGGACAACTATTTCATAACCCATGTCTCTGCTGGTTGGAGCCACTCAGGTTTTGTTTCAGATACTGGGTGCCTGTTCACTTGTGGGGATGGCTCCTTTGGTCAACTTGGGCATGGTGATTATATCTCACATTGTACCCCCGTCAAAGTGTCGTGCTTTGTTGATCAGCATGTTGCACAGGTAGCATGTGGAATGCGCCATTCTCTTGTCTTGTTGAAAGGTTGTCTTTCAGATCAAGTTTATGGATTTGGCTCTGGGAAGCGTGGTCAATTAGGTGTCTCAAAAGATAAAATCAAATCTATAAATCTTCCTAAAGTTATTAATGGCTTTGAAGATGTGGAAATTGCTGGCATTGCTGCAAATGGTGATCATAGTGCTGCATTATCTGTTGATGGGAATCTTTACACCTGGGGAAGAGGCTTCAAGGGCTATGAGGATTCTCATCTTCCACAAGGCTTAAACTCTACGTTGAAATTTACTAAAGCCACTCTTGGGTGGAACCATGCTTTAGCTATGACTGGTGACGGGGAGGTTTATATGCTCGGTGGCAACCACCTTGGAGTGCTTAGTGATCTTCACAGTGAAAGACCGGCTAAACAGTTAACCGATTCAAGAGAAGCCAATTTGGAGAAAGTCCCTGGCCTTGATGGAACAAGGATTACTGATATTGCTACTGGAGCTGAGCATTCGGTTCTAGTCACAGAGAATGGAGAAATAAAGACATGGGGTTGGGGTGAGCATGGTCAACTTGGCTTAGGGGATGATGGTGACCGAATCAGTCCTGTTACAGTTAATCTTGGTTACGATCTGAATGAAGCTGCATCAGTCAGAGTCTATTGCGGAAGTGGTTTCACATTTGCTTTAACCAAGCCATAA 1161 0.4453 MEESEQVKTEEEKKERVWSWGAGTDGQLGTAKLQDEHIPQQISLSSFVSSLACGGAHVIALISAGKVLSWGRGNSGQLGHGEVVNNMLYPKAVTSLDNYFITHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDYISHCTPVKVSCFVDQHVAQVACGMRHSLVLLKGCLSDQVYGFGSGKRGQLGVSKDKIKSINLPKVINGFEDVEIAGIAANGDHSAALSVDGNLYTWGRGFKGYEDSHLPQGLNSTLKFTKATLGWNHALAMTGDGEVYMLGGNHLGVLSDLHSERPAKQLTDSREANLEKVPGLDGTRITDIATGAEHSVLVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDLNEAASVRVYCGSGFTFALTKP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1863 386 Gene3D - 100 295 IPR009091 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 15 64 IPR000408 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 173 226 IPR000408 -
Mal6g1863 386 Pfam Regulator of chromosome condensation (RCC1) repeat 173 223 IPR000408 -
Mal6g1863 386 Pfam Regulator of chromosome condensation (RCC1) repeat 332 383 IPR000408 -
Mal6g1863 386 Pfam Regulator of chromosome condensation (RCC1) repeat 65 113 IPR000408 -
Mal6g1863 386 Pfam Regulator of chromosome condensation (RCC1) repeat 118 166 IPR000408 -
Mal6g1863 386 Pfam Regulator of chromosome condensation (RCC1) repeat 16 61 IPR000408 -
Mal6g1863 386 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 156 166 IPR000408 -
Mal6g1863 386 Gene3D - 6 99 IPR009091 -
Mal6g1863 386 Gene3D - 296 386 IPR009091 -
Mal6g1863 386 SUPERFAMILY RCC1/BLIP-II 172 385 IPR009091 -
Mal6g1863 386 PRINTS Chromosome condensation regulator RCC1 signature 67 83 IPR000408 -
Mal6g1863 386 PRINTS Chromosome condensation regulator RCC1 signature 327 348 IPR000408 -
Mal6g1863 386 PRINTS Chromosome condensation regulator RCC1 signature 260 278 IPR000408 -
Mal6g1863 386 PRINTS Chromosome condensation regulator RCC1 signature 16 32 IPR000408 -
Mal6g1863 386 PRINTS Chromosome condensation regulator RCC1 signature 48 61 IPR000408 -
Mal6g1863 386 MobiDBLite consensus disorder prediction 1 19 - -
Mal6g1863 386 SUPERFAMILY RCC1/BLIP-II 15 190 IPR009091 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 65 117 IPR000408 -
Mal6g1863 386 MobiDBLite consensus disorder prediction 1 22 - -
Mal6g1863 386 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 318 328 IPR000408 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 118 169 IPR000408 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 271 331 IPR000408 -
Mal6g1863 386 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 332 386 IPR000408 -
Mal6g1863 386 PANTHER OS01G0777800 PROTEIN 17 380 - -
Mal6g1863 386 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 17 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1863 Mal-Chr6 37866890 37870247 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1863 - - gmx:100793672 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1863 6 37866890 37870247 Mal6g1863 6 37866890 37870247 ECH