Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1862 ATGCATTCTCACACCGCACCCTCTCTTTCCTTCTTCTTTCCTCATATAGCCCTTTCTCTCTTTCCCCCTATCCTCGTCTCGTTTCCCTCTTCAAGAAAAGTTCAAAGTTTCGCAGTTTTAAGCGAGCTTAGTTTGGTTATTGAGCGCGAGAGTTTTTCCCTCAGGAAGGGAAATTGGAATACCAACAAGGGTTTGTGTTGGTCTTGTTCTCGGTTTTTGACTCGTTGTAAGGATTGGGTTGGAGATTTTTCCTCTTTGGAAGAGGAGTTGTTGGAGTTCATGCAGAATTCAGAGAACCCAGAAAGGTTTCCAACAAAGGAAGAGTTGGTCAGAGCTGGGAGAGTGGATTTGGTTGAAGCAATTGTGAAAGAAGGTGGGTGGCTTTCTTATGGGTGGAATTTGAATCATGGGTCTGTTGAAAGTGTTGATTTTGAAGATGGGAATGTAACTATGGCTTCTGGGGTTGCTGCTTCATCAAATTCTTCTTTGGATAACTCTTCTCAACAAGCTGAATCAGTGGAAATAGAAGCTGAGGAGTCTGGCATTGACGGTATCCTGAATCGGCTGGAGAAATACAGAAATAATTCTTTTGGACGTGGATTCGGAGAGAAAGAAGATGGTTTGTCTGATAATAATAAAGATAAAGAGAAATGGGATAATAGAACCACAACGGATGGAGTTGTAAAGGTAGCTGCCAAGCGTGACAATAGTAATAGACCATCCTCATTGAACCCAAGAACCAGTCCTCTCAGTGGTTCACAGGTCAAACTTGATCAACATGGATCTCAATTAGTTTCTGATAATTCAAGAAACTCAATTAAGCCAGACACTTGGAGAAGTTGGATTGATCAGAGAACTGGTTTTTCAAATGCAGATTTTGAAGATGCTGAAATTCTTCCTAGTGAAATTCAGAAAGGAGGTGTGAGCGGTATTTCAGGAGGACCTGAAATTGTCAAAATCGGAGAGTTTTCTCACGAGCCTATAAACAGAGAAACAGGATTAGATTCTCTTGACATAATTGGAAATGCAAATCACAATGACATAAAATCCCGTATCCTACTTCTGGAGTCAGAGCTATCCTCTGTACTTCACTCAATGAGGTCAAACACCAGTGAAGTTAAAATGCTGACGGAGCAGAAGACTTCTTCTGATGATCTAGCAAAGCTTTCCGATGCTTGGGAATTCCAGGAAACTGAAATCATGAATGCTCAAGCCAGACTGCGTTCGTTACGTGCTAATTTGGCAGTGTTAGAAGGAAAGATGGCATTGGCAATAATGGATGCACAGAAGGATATTGATGAGAAGCAGAAGAAGATTGATAATGTCCACAATGCTTTGAAATTTCTGAAGAGTACTTGTGTAGTTTGGCCGAATATCGCTTCAGAAGTATTTTTAGTTGGATCATTTGATGGTTGGTCTTCCCAGAGAAAGATGGAGAAATCAAATACTGGTATATTTTCTGTGTTTTTGCAGCTGTATCCTGGAAAATACGAGATCAAGTTCATTGTTGATGGTGAATGGAAAATTGATCCATTGCGTCCGGTGGTGAACAACAATGGCTATGTGAATAATCTTCTTGTCGTTCATGATTGA 1593 0.4068 MHSHTAPSLSFFFPHIALSLFPPILVSFPSSRKVQSFAVLSELSLVIERESFSLRKGNWNTNKGLCWSCSRFLTRCKDWVGDFSSLEEELLEFMQNSENPERFPTKEELVRAGRVDLVEAIVKEGGWLSYGWNLNHGSVESVDFEDGNVTMASGVAASSNSSLDNSSQQAESVEIEAEESGIDGILNRLEKYRNNSFGRGFGEKEDGLSDNNKDKEKWDNRTTTDGVVKVAAKRDNSNRPSSLNPRTSPLSGSQVKLDQHGSQLVSDNSRNSIKPDTWRSWIDQRTGFSNADFEDAEILPSEIQKGGVSGISGGPEIVKIGEFSHEPINRETGLDSLDIIGNANHNDIKSRILLLESELSSVLHSMRSNTSEVKMLTEQKTSSDDLAKLSDAWEFQETEIMNAQARLRSLRANLAVLEGKMALAIMDAQKDIDEKQKKIDNVHNALKFLKSTCVVWPNIASEVFLVGSFDGWSSQRKMEKSNTGIFSVFLQLYPGKYEIKFIVDGEWKIDPLRPVVNNNGYVNNLLVVHD* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1862 530 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 13 529 - -
Mal6g1862 530 Gene3D Immunoglobulins 448 530 IPR013783 -
Mal6g1862 530 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 13 529 - -
Mal6g1862 530 SUPERFAMILY E set domains 452 529 IPR014756 -
Mal6g1862 530 MobiDBLite consensus disorder prediction 199 223 - -
Mal6g1862 530 Coils Coil 425 452 - -
Mal6g1862 530 Coils Coil 175 195 - -
Mal6g1862 530 MobiDBLite consensus disorder prediction 235 271 - -
Mal6g1862 530 Pfam Glycogen recognition site of AMP-activated protein kinase 452 529 IPR032640 -
Mal6g1862 530 MobiDBLite consensus disorder prediction 155 174 - -
Mal6g1862 530 Coils Coil 400 420 - -
Mal6g1862 530 MobiDBLite consensus disorder prediction 155 177 - -
Mal6g1862 530 MobiDBLite consensus disorder prediction 199 271 - -
Mal6g1862 530 CDD E_set_AMPKbeta_like_N 451 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1862 Mal-Chr6 37860307 37865633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1862 - - cam:101492605 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1862 6 37860307 37865633 Mal6g1862 6 37860307 37865633 ECH