Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1801 ATGGAAGCGGGAAGTGCTCTCCGTCTCCATTTCACTCTTAACTTTCCCACTTACATTCCCATTTTCGCTTTCAATCACACTTCAAAACCAAAAACCGCGTTCACTCTTTCATCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTACTGTTCACAGTTTCCGAAGCCCAACGCCCAAAGGCGATTTTCTAGCTGATTGGGCCTCACAAAACGACGACGTCGTTCGTCCCCTTCCTATCTACGTTGGAACTGTCTCTCTCTTCGCTGTCCTCTTCAATCGCGCCATCTCCGGCATCGCTCCTGTTGCCGACGCCGGCAGTTCACAATCAAGAGCAGACCTCTTAACTTTAGGTTTGGCTGTCACTAATATTTTGGCTGGCCTCGTATGGCTTTCCATAAAACCCAAATCTATAAGTGTGGATTTGAACTCGGGGAAGATGATTGGCAGTGCTAAGGAGAGTGGAGGACTCTACTACCTTGACATTGGATCTGCATCACAACTACCTTCAGAAACAATAAGTTCCTGCTTTGAGTCTTTTTTTGTTTTGAATAATAATGATGACAATGTTATGTTATGGCATTTACGATTAGGTCATCCTAGTTTTCGCTACTTAAAACACTTGTTTCCTAAGTTATTTCATAATAAGAACTTTTCTTTGTTTAAATGTGAAGCATGTGAGTTTGCAAAGCATCATCGTTCCCAATTTCCAATACAGCCTTATAAACCATCAAAACCTTTTTCTATTATTCACAGTGATGTTTGGGGCCCTAACCGTACAAGTACACTCTCTCTCAAAAAATGGTTTATCACATTTATAGATGACCATTCAAGAGTATGTTGGGTGTACTTGTTAAAGGGAAAATCAGATGTTTGTCATGCTGTAAAGGATTTTTTTAAGATGGTGCAGAACCAATTTCAAACAAATATTCAAGTCTTTAGAAGTGATAATGGCAAAGAATATTTTAACACTATTTTGGATGATTTTTTTCTTAAAAATGGGATTGTACATCAAAGTTCATGTCCTAATACTCCTCAACAAAATGGAGTTGCCGAAAGGAAAAATAGACATTTATTGGAGGTTGCTAGAGCTTTACTTTTCTCAAGTAAAGTACCAAACTATTTGTGGGGCGAAGCTGTTTTAACAGCTGCATATTTAATTAACAGAATGCCCTCAAAAGTTCTCAATTTTCAAACTCCAATTAATACTTTCAAAGGATGTTTTCCTAGTACTCGTGTTTCAGCTGATCTGACATTAAAAATCTTTGGTTGCACAGCCTTTGTTCATGAACATAAAAATGTCGGAAAACTTGAACCACGTGCTATAAAATGTGTTTATATTGGATACTCCCCTACCCAAAAGGGATACAAATGTTTTGATCCAAAAAACAAGAAAATGTTTGTCACTGTGGACGTTACATTCTTTGAAAATAAACCTTTTTTCGATGGCACTTATCTTCAAGGGGGGGATATAAAAGAAGATTCGTTTCAAACTGAGGACATGAGTTTTTTAAATAATTTATCTTTGCCTGAACCACAAAGTTCTAAGACTTATACTTCTGCACCAACAGAAAATGGCCATGATTCTTTATCTGATCCTACTCCTATTATGAGTAAGGAACTTGGTGAATCTGAGCCTACATTTTCTCATGAAGAAAACAATGAGAATCTTGAAAAAGATGATAATGATGATCTAATTGAAATGCCACAAAATAATGAGTCACTTAAAGAGAACAAATTTCAAATAGGAAACAGGACTTGGAAAGGGAAGGTTTTTGTGAAAAAGCACCACAAGGAAAGGGATGAGTCCACATCTCAACACTGTCAGGAATCTGAACCGGGGGATGATCAACCTCCTAAGAAAACGAAAGGTAAATCCCCAGGGTGTTGA 1899 0.3765 MEAGSALRLHFTLNFPTYIPIFAFNHTSKPKTAFTLSSSSSSSSSSSSSSSSTVHSFRSPTPKGDFLADWASQNDDVVRPLPIYVGTVSLFAVLFNRAISGIAPVADAGSSQSRADLLTLGLAVTNILAGLVWLSIKPKSISVDLNSGKMIGSAKESGGLYYLDIGSASQLPSETISSCFESFFVLNNNDDNVMLWHLRLGHPSFRYLKHLFPKLFHNKNFSLFKCEACEFAKHHRSQFPIQPYKPSKPFSIIHSDVWGPNRTSTLSLKKWFITFIDDHSRVCWVYLLKGKSDVCHAVKDFFKMVQNQFQTNIQVFRSDNGKEYFNTILDDFFLKNGIVHQSSCPNTPQQNGVAERKNRHLLEVARALLFSSKVPNYLWGEAVLTAAYLINRMPSKVLNFQTPINTFKGCFPSTRVSADLTLKIFGCTAFVHEHKNVGKLEPRAIKCVYIGYSPTQKGYKCFDPKNKKMFVTVDVTFFENKPFFDGTYLQGGDIKEDSFQTEDMSFLNNLSLPEPQSSKTYTSAPTENGHDSLSDPTPIMSKELGESEPTFSHEENNENLEKDDNDDLIEMPQNNESLKENKFQIGNRTWKGKVFVKKHHKERDESTSQHCQESEPGDDQPPKKTKGKSPGC* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1801 632 MobiDBLite consensus disorder prediction 508 535 - -
Mal6g1801 632 PANTHER - 30 143 IPR044705 -
Mal6g1801 632 MobiDBLite consensus disorder prediction 39 59 - -
Mal6g1801 632 Pfam Integrase core domain 248 348 IPR001584 GO:0015074
Mal6g1801 632 Gene3D - 241 427 IPR036397 GO:0003676
Mal6g1801 632 MobiDBLite consensus disorder prediction 39 60 - -
Mal6g1801 632 MobiDBLite consensus disorder prediction 508 570 - -
Mal6g1801 632 ProSiteProfiles Integrase catalytic domain profile. 245 411 IPR001584 GO:0015074
Mal6g1801 632 SUPERFAMILY Ribonuclease H-like 244 405 IPR012337 -
Mal6g1801 632 MobiDBLite consensus disorder prediction 598 625 - -
Mal6g1801 632 Pfam GAG-pre-integrase domain 159 234 IPR025724 -
Mal6g1801 632 Pfam Cofactor assembly of complex C subunit B, CCB2/CCB4 81 143 IPR021325 -
Mal6g1801 632 MobiDBLite consensus disorder prediction 597 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1801 Mal-Chr6 36128515 36140000 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1801 - - ecad:122587683 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1801 6 36128515 36140000 Mal6g1801 6 36128515 36140000 ECH