Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1781 ATGGATATCACCACCAACACTCAGCTTATCCTCGCACTCCTCCAACCTCGCCACCACACTTTCTCTCTCCTCCAAACACCAACCACTTTCCCATTCTCTCTCCTCCCCCATCGTTCCCTCTCTCACTCCCTCAAATTCCCTCTCTCCTTCTCCTTCAAATCCCCACCCTCACCCATCCGCACCTTCAATGCTGACGACGACGAAGAAGACGAAGAAGAAGACGACGAAGACGAAGAAGATGAAGAAGATATCGCGGCTGATGAATATGATGAAGTTGTATCTAGTGAGGTTGAGGTTGGGGATTCAAATGAAGAAGATGAAGCGTTTGAAGTGGAAGAAGAATTTGTTAGACATGATGAGGGATTCAAGTGGCAGAGAGTTGAGAAGCTTTGTAATGAAGTTAGAGAGTTTGGTGTTGGAATTATTGATGTTGATGAACTTGCTTCTGTTTATGATTTTCGAATTGATAAGTTTCAGAGGCAAGCGATTAAAGCTTTTCTAAGAGGTTCGTCGGTGGTGGTTTCTGCTCCGACAAGTAGCGGGAAGACTTTGATTGCAGAAGCTGCGGCGGTTGCTACAGTGGCTAGGGGACGGAGATTGTTCTACACGACTCCTCTTAAAGCGTTGTCTAATCAGAAGTTTCGTGAATTTCGGGAGACTTTTGGCGACAACAATGTTGGCCTTCTTACGGGTGATTCTGCTGTTAACAAGGATGCTCAGGTTTTGATTATGACTACGGAGATATTACGAAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAAGTATACTTGTCAATGTTGATGTGATTGTTTTGGACGAAGTTCATTACCTTAGTGACATATCCCGCGGTACAGTTTGGGAAGAAATTGTTATTTATTGCCCTAAAGAAGTTCAACTTATTTGTCTCTCTGCAACCGTTGCAAATCCAGATGAGTTGGCTGGTTGGATTGGTCAGATTCATGGTGGAACAGAGTTGGTAACATCGTCAAAACGCCCAGTTCCTTTGAATTGGCATTTCTCTTTGAAGAATTCCTTATTACCACTTCTTGATGATAAAGGAACACAGATGAACAGGAAGCTGTCACTCAATTACTTACAACTTCAAGCTGCAAGAGTTAAACCTTACAAGGATGATTGGCCTAGAAAAAGGAATTCCCGGAAACGTGGAACTCGCACAAGCTTTGATAGTGATGATAGCATGTTACAACAACGTTCTCTTTCAAAGAATGACATAAATGCAATTCGTCGTTCACAAGTTCCTCAAATAATCGATACGTTATGGCACCTTCAGTCAAGGGATATGCTTCCAGCTGTCTGGTTTATTTTTAGCAGAAAAGGTTGTGATGCAGCTGTGCAATATGTTGAAGATTGCAAACTTTTAGATGAGTGTGAAGCAAGTGAGGTTCAACTAGCTTTGAAGAGGTTCCGCATTCAGTATCCTGATGCTGTCAGAGAAACAGCAGTGAAAGGACTTTTCCAAGGGGTTGCTGCACATCATGCTGGATGTCTGCCTTTGTGGAAAGCCTTCATAGAAGAGTTGTTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACCGAAACTCTGGCTGCCGGAATCAATATGCCTGCTAGAACAGCTGTTATTTCATCCCTAAGCAAAAGAAGTGATACTGGGCGCACCCTATTGACCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGTAGAGGCATTGATGAAAGTGGTCATGTAGTCCTCGTCCAAACTCCTAATGAAGGTGCTGAAGAGTGCTGCAAGGTACTTTTTTCTGGACTTGAGCCTCTTGTGTCGCAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGGTGGTGGGAAAGCCATTCGTAGGTCAAACACGTCAGATGACATGAAACCTTCCTCAGGGAAAACTTTGGATGAAGCTAGGAAGTTAATTGAGCAAAGTTTTGGAAATTATGTTAGTAGCAGTGTTATGCTGGCTGCTAAAGAGGAGCTTAAAAGAATTGAAAAGGAAATTCAGTTGTTGATGTCAGAAATCACTGATGAAGCCATAGATAGAAAAAGTAGGAAGGCTTTATCACAGCGACAATACAAGGAGATTGCAGAATTACAGGAAAATTTAAGGGCAGAGAAACGTGTTCGGACTGAATTGCGAAAGCAGAAGGAAGCAAAGAGAATATCTGCCTTGAAACCTCTATTGGAAGAGTCTGGAAATGGACATTTACCATTTTTGTGCTTGCAGTATAAAGATTCTGACGGAGTTCACCATTCAATTCCTGCTGTGTTTTTGGGGAAAGTCAACTCCCTTAGTGCTTCAAAACTCAAAAACATGATCAGTTCTGTCGATTCGTTTGCACTAAATTCAGCAGATGCAGATTCTGAATTGAATGAAGATCCTGTACCATCATATCACGTAGCTCTTGGCTCAGATAACTCTTGGTATCTATTTACAGAAAAGTGGATTAAAACAGTATATGAGACAGGCTTTCCCGATGTTCCATTAGTTCAAGGGGATACCCGACCTCGAGAAATAATGAGTGATCTTCTTGATAAGGAAGATATGAAGTGGGATAACCTTGCTCACTCTGAACAAGGTGATTTATGGTTCACAGAAGGATCTCTAGAGACATGGTCTTGGAGCTTGAACGTTCCAGTTTTGAGTAGCTTCTCTGAAAATGATGAGGTGCCACTGAAGTCTCAAGCGTACAGAGATGCAGCTGAACAATACAAGGACCAAAAAAATAAAGTTGCACGCTTGAAAAAAAAGATATCTCGTACTGAAGGCTATAAAGAATATAATAAAATCCTAGACGCAGTCAAATTTATTGAGGAGAAAATCAAGCGAATGAAGACTAGATCCAAACGTTTGACTAATCGGATAGAACAAATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTGAGCAATGTCATACGTGAAACCAGAGCTTTAGACATTAATACACATGTCATATATCCACTAGGGGAAACTGCTTCAGCAATTCGTGGAGAAAATGAGCTATGGCTTGCAATGGTTCTTCGTAGTAAAATTTTAGTAGAACTAAAACCTGCACAACTTGCTGCAGTGTGTGCAGGTTTGGTATCTGAAGGGATTAAAGTCAGACCCTGGAAGAACAACAATTACATTTATGAACCTTCTGCAACTGTAGTCAATATCATAGGTTTATTGAATGAGCAAAGAAGAGCCCTATTGACAATTCAGGAGAAACATGGGGTGACAATATCTTGCTGTTTGGATAGCCAGTTTTGTGGTATGGTTGAAGCCTGGGCTTCTGGGTTAACATGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGTGATCTAGCTCGTCTCCTTCGACGGACCATTGATCTATTAGCTCAGATTCCTAAATTGCCAGATATTGATCCATTGTTGCAAAAGAATGCAAGGGCTGCTTATGATGTCATGGATCGGCCTCCAATAAGTGAACTTGCTGGGTAG 3501 0.4176 MDITTNTQLILALLQPRHHTFSLLQTPTTFPFSLLPHRSLSHSLKFPLSFSFKSPPSPIRTFNADDDEEDEEEDDEDEEDEEDIAADEYDEVVSSEVEVGDSNEEDEAFEVEEEFVRHDEGFKWQRVEKLCNEVREFGVGIIDVDELASVYDFRIDKFQRQAIKAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSILVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGGTELVTSSKRPVPLNWHFSLKNSLLPLLDDKGTQMNRKLSLNYLQLQAARVKPYKDDWPRKRNSRKRGTRTSFDSDDSMLQQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVQLALKRFRIQYPDAVRETAVKGLFQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFSGLEPLVSQFTASYGMVLNLLGGGKAIRRSNTSDDMKPSSGKTLDEARKLIEQSFGNYVSSSVMLAAKEELKRIEKEIQLLMSEITDEAIDRKSRKALSQRQYKEIAELQENLRAEKRVRTELRKQKEAKRISALKPLLEESGNGHLPFLCLQYKDSDGVHHSIPAVFLGKVNSLSASKLKNMISSVDSFALNSADADSELNEDPVPSYHVALGSDNSWYLFTEKWIKTVYETGFPDVPLVQGDTRPREIMSDLLDKEDMKWDNLAHSEQGDLWFTEGSLETWSWSLNVPVLSSFSENDEVPLKSQAYRDAAEQYKDQKNKVARLKKKISRTEGYKEYNKILDAVKFIEEKIKRMKTRSKRLTNRIEQIEPSGWKEFMQVSNVIRETRALDINTHVIYPLGETASAIRGENELWLAMVLRSKILVELKPAQLAAVCAGLVSEGIKVRPWKNNNYIYEPSATVVNIIGLLNEQRRALLTIQEKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQKNARAAYDVMDRPPISELAG* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1781 1166 SMART helicmild6 488 574 IPR001650 -
Mal6g1781 1166 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 50 1162 - -
Mal6g1781 1166 Coils Coil 937 964 - -
Mal6g1781 1166 MobiDBLite consensus disorder prediction 57 89 - -
Mal6g1781 1166 MobiDBLite consensus disorder prediction 381 402 - -
Mal6g1781 1166 CDD SF2_C_Ski2 404 586 - -
Mal6g1781 1166 Gene3D - 335 605 IPR027417 -
Mal6g1781 1166 MobiDBLite consensus disorder prediction 381 397 - -
Mal6g1781 1166 Gene3D - 116 334 IPR027417 -
Mal6g1781 1166 Coils Coil 907 927 - -
Mal6g1781 1166 Coils Coil 698 725 - -
Mal6g1781 1166 Gene3D - 937 1158 - -
Mal6g1781 1166 Pfam DSHCT (NUC185) domain 995 1161 IPR012961 -
Mal6g1781 1166 SMART ultradead3 151 341 IPR014001 -
Mal6g1781 1166 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 50 1162 - -
Mal6g1781 1166 Coils Coil 663 683 - -
Mal6g1781 1166 Pfam DEAD/DEAH box helicase 158 310 IPR011545 GO:0003676|GO:0005524
Mal6g1781 1166 SMART DSHCT_2 991 1165 IPR012961 -
Mal6g1781 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 588 IPR027417 -
Mal6g1781 1166 MobiDBLite consensus disorder prediction 64 89 - -
Mal6g1781 1166 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 421 620 IPR001650 -
Mal6g1781 1166 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 163 327 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1781 Mal-Chr6 34505646 34513713 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1781 K26077 - gmx:100780908 1800.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1781 6 34505646 34513713 Mal6g1781 6 34505646 34513713 ECH