Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1777 ATGGCACTATCACGTTTATCATCATCATCTACCATCAAATCAAATCTCATGAAACCAATCTCCACAATCTTCACTCACAACCGTTCGATCTCCTCCGACACCACACTCACAATCGAAACCTCAATCCCTTTCACCGCCCACAACTGCACTCCACCCTCCACCACCGTCACCACTTCCCCCAATGAACTCCTCACCTTCTTCCACACCATGTCCCTCATGCGCCGTATGGAAATCGCTGCTGACTCTCTCTATAAATCCAAACTCATCCGTGGTTTCTGTCACCTTTACGATGGTCAAGAAGCCGTCGCAGTCGGCATGGAAGCATCAACCACCAAAAAAGACTGTATTATCACTGCTTACCGTGATCACTGTACTTTCCTCGGCCGCGGCGGAACGTTGTTGGAAGTCTATGCTGAACTTATGGGGAGGGCTGATGGGTGTTCTAAAGGGAAAGGTGGGTCCATGCATTTTTATAAGAAGGATTCTGGGTTTTATGGTGGTCATGGGATTGTGGGTGCTCAGGTTCCTCTTGGTTGTGGTTTGGCTTTTGGGCAGAAGTATTTGAAGAATGAGAGTGTTACTTTTGCGCTGTATGGTGATGGTGCTGCTAATCAGGGGCAGCTTTTTGAAGCGCTTAATATTGCTGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAGAATAATCACTATGGAATGGGAACTGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGAGAGGAGATTATGTTCCTGGGTTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAAGCTGTTAAATTTGCAAAGGAGCATGCTTTGAAGAATGGTCCCATTATTCTTGAAATGGACACTTACAGATACCATGGTCACTCTATGTCTGATCCCGGCAGCACATACCGAACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCTCATGACATTGCTACTGAAAAGGAGCTCAAGGACACCGAAAAAGAAGTCAGAAAACAAGTTGAAGAAGCCATTGCTAAAGCAAAGGAGAGTCCAGTGCCATCACCTTCTGATCTATTTACCAATGTATATGTTAAAGGATACGGGGTTGAGGCATTTGGTGCTGATAGGAAAGAAGTGAGAGCTACTTTGCCATAA 1182 0.4535 MALSRLSSSSTIKSNLMKPISTIFTHNRSISSDTTLTIETSIPFTAHNCTPPSTTVTTSPNELLTFFHTMSLMRRMEIAADSLYKSKLIRGFCHLYDGQEAVAVGMEASTTKKDCIITAYRDHCTFLGRGGTLLEVYAELMGRADGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKNESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQAVKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKQVEEAIAKAKESPVPSPSDLFTNVYVKGYGVEAFGADRKEVRATLP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1777 393 Coils Coil 335 359 - -
Mal6g1777 393 CDD TPP_E1_PDC_ADC_BCADC 66 356 - -
Mal6g1777 393 MobiDBLite consensus disorder prediction 296 315 - -
Mal6g1777 393 Pfam Dehydrogenase E1 component 69 364 IPR001017 GO:0016624
Mal6g1777 393 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 13 393 - -
Mal6g1777 393 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 61 373 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mal6g1777 393 Gene3D - 21 387 - -
Mal6g1777 393 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 13 393 - -
Mal6g1777 393 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 53 374 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1777 Mal-Chr6 34368405 34374173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1777 1 393 Acyl Lipid Metabolism Gene Families AT1G24180 77.273 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1777 K00161 - cit:102613187 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1777 6 34368405 34374173 Mal6g1777 6 34368405 34374173 ECH