Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1758 ATGAAATTGAGATCACAAAGAACCTATATGTTCCTCTTACTACTATCTTTTTTATTTGCAGATATATCTGAATCCATTTCTTTTGCACCAGCAATTGGATTAATAACCAGAAGCAGAATCCCCTTCTTTCTCAAACGCATAATTTCAAATAAATCGTTTTCTAGCATCTGGAATAAAATCAAGTCATTCTTCAACAAAGCTCTAAAGATTGGAGACACAGTTAATGGAATTTCCGATTTGAAAGAATATTTACAATTCTTCGGTTACTTAAACTCTTCCACTTTGAATTCAACTTTCACAAATAAGTTCACGGAAAATCTTCGATCAGCAATACTCGAATTTCAAGAAAATTTCAATCTCACCAAAACAGGTGAATTCGATCAAGATACATATAAAATCATTTCAAAGCCACGTTGTGGTGTTCCTGACATCATCAATGGAACCACCACCATGAAGAACAACTTCACCAACAAAACAACATTGTTTAAACCGTGGTGGAGGAACGCGGAGAACAAATCGTTAACATATGCTTTTCATCCGGAGAATAATGTCACGGGCGACGTTAAGTCTTTGTTTCAAGACGCGTTTAACCGTTGGTCAAATGTAACAGCATTGAACTTCACTGAGACGACGTTGTTTAATAGTTCGGATATTCATATAGCGTTTTCGATGTTGGATGGAAAAGGTGGAATGGTTGGAGGTGGTTATATAAACAATAGTGTTAACGTTGGGAGTATTTATTTGGATGCAGAGGAAAATTGGGTGTTACATAGTGAGAATGTTGTTGAAGAGGATGACATGGATTTGGAATATGTTGTGATGCATGAAATTGGTCATTTACTTGGGTTGGAGCATTCTTCTGTGGAAGAAGCTATTATGTATCCGATTGTGTTGCAAGAAAAGAAGATTGAGTTGGTGAATGTTGATGATTTGCTGATGATTCAGCAAATATATGGTGTCAATACTTGA 969 0.3591 MKLRSQRTYMFLLLLSFLFADISESISFAPAIGLITRSRIPFFLKRIISNKSFSSIWNKIKSFFNKALKIGDTVNGISDLKEYLQFFGYLNSSTLNSTFTNKFTENLRSAILEFQENFNLTKTGEFDQDTYKIISKPRCGVPDIINGTTTMKNNFTNKTTLFKPWWRNAENKSLTYAFHPENNVTGDVKSLFQDAFNRWSNVTALNFTETTLFNSSDIHIAFSMLDGKGGMVGGGYINNSVNVGSIYLDAEENWVLHSENVVEEDDMDLEYVVMHEIGHLLGLEHSSVEEAIMYPIVLQEKKIELVNVDDLLMIQQIYGVNT* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1758 322 PRINTS Matrixin signature 192 207 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mal6g1758 322 PRINTS Matrixin signature 306 319 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mal6g1758 322 PRINTS Matrixin signature 134 147 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mal6g1758 322 PRINTS Matrixin signature 272 297 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mal6g1758 322 SUPERFAMILY PGBD-like 65 144 IPR036365 -
Mal6g1758 322 Pfam Putative peptidoglycan binding domain 75 133 IPR002477 -
Mal6g1758 322 Gene3D Collagenase (Catalytic Domain) 69 322 IPR024079 GO:0008237
Mal6g1758 322 PANTHER MATRIX METALLOPROTEINASE 9 320 - -
Mal6g1758 322 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 129 318 - -
Mal6g1758 322 ProSitePatterns Matrixins cysteine switch. 137 144 IPR021158 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Mal6g1758 322 Pfam Matrixin 170 319 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Mal6g1758 322 PANTHER MATRIX METALLOPROTEINASE 9 320 - -
Mal6g1758 322 SMART col_5 162 320 IPR006026 GO:0006508|GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1758 Mal-Chr6 33668759 33670118 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1758 - - lja:Lj0g3v0119119.1 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1758 6 33668759 33670118 Mal6g1758 6 33668759 33670118 ECH