Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1714 ATGAAGGAATGGTTGGAGAAGAAGCCGAAGGGGTTTGGTGAAGGGAAAGTGTATGATACTTCAATTGAAGATAAGCTGTTTGAAGAAATGCAGAAGAGTAAACAAGTTCAAGCTCTTAATTTGAAGAAGCTTAAAACCAATCCTATCAAAAATAATGTCAGAAAGAAGATAGATGAAATAGTTGTTCCTGTCCGAAGCCGAGTGCGCTTGATGAATTTACCAAAGAAAAGGCAAATTGACAGGGATTTGAAATTAGCTTTTCAAGGGATTCCGGGCATAAGAAATATAGTCCCTGCTGTTAGGGCAAACAAGAAGACAAGGGATCCTGTCTGCAAGGGTTTTGCTTTTGTAGATTTCAAGCATGAAGAGGATGCAGTTAGGTTTGTAGAGTTATACACAGGACAAACTATTACTTTTGGCAAAATTCAGAAGCAGATAAAATGCGAAATTGTAAATGCACAGTCTTCCTCTTCTCCGGGTTTAAGCAAAAATCTCAATTCTGCTCTACCTCTCTTGCCCTCCTTTGAAGAAGATTCAAATGAGGATTCCGATATGGATGATTCTGCCTTCAATACATGGGACGAGACTGAAGTAGATGATTCGGATGCGCTACAGGAAAGTGATGGGGAGAGTCAAGAGTTCACCACTGCTTTGATGGTGGACAGTGATGACAGCTTAGAAATGACGAATGATTCTGAAATCAAATCACTTGTCTCTGAGCAGGTTGACAGAAACCCCTCAGCTGAGAAGAAGTCATCTGTCATTAAACAAGAGAATGCCCCTAAGAAAAAATCTAGTACGAAAGATAACGCAAAAAAGGTTTTAGATATTCCTGGTTCTGCGAAAAGGTGA 852 0.3979 MKEWLEKKPKGFGEGKVYDTSIEDKLFEEMQKSKQVQALNLKKLKTNPIKNNVRKKIDEIVVPVRSRVRLMNLPKKRQIDRDLKLAFQGIPGIRNIVPAVRANKKTRDPVCKGFAFVDFKHEEDAVRFVELYTGQTITFGKIQKQIKCEIVNAQSSSSPGLSKNLNSALPLLPSFEEDSNEDSDMDDSAFNTWDETEVDDSDALQESDGESQEFTTALMVDSDDSLEMTNDSEIKSLVSEQVDRNPSAEKKSSVIKQENAPKKKSSTKDNAKKVLDIPGSAKR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1714 283 SMART rrm1_1 67 149 IPR000504 GO:0003723
Mal6g1714 283 MobiDBLite consensus disorder prediction 244 283 - -
Mal6g1714 283 MobiDBLite consensus disorder prediction 219 283 - -
Mal6g1714 283 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 283 - -
Mal6g1714 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 137 IPR000504 GO:0003723
Mal6g1714 283 Gene3D - 68 159 IPR012677 -
Mal6g1714 283 MobiDBLite consensus disorder prediction 219 243 - -
Mal6g1714 283 CDD RRM_SF 68 137 - -
Mal6g1714 283 SUPERFAMILY RNA-binding domain, RBD 63 157 IPR035979 GO:0003676
Mal6g1714 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 66 153 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1714 Mal-Chr6 32606410 32609467 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1714 - - mtr:MTR_5g035330 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1714 6 32606410 32609467 Mal6g1714 6 32606410 32609467 ECH