Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1674 ATGCTATGCTCTCTAATCCGTTTGCGCCGTAACACTTTTTCTTCTTCTTCAACCTCGCTCCTTCTCCACCTCACTAACCGTTTCTCTTCAACCACCTCCTCCTCCTCCTTCTCCGCCGCCATGGTTGCTCACGCCAAGGACGAAACCTACCTAGCAACCACAATCCCAAAGCGCATCCAACTCTTCGAATCAATCCAAGCAGAGCAACAGACTCGGCGGCTATCACTCTCTCCCGATCCGATTAAGGTAACACTTCCCGACGGGAACGTGAAGGAAGGGAAGAAATGGCAGACAACTCCGTTCGATGTTGCGCTTGAGATTTCGAAGAATTTGGCGAATAATGCTCTTATTGCTAAGGTTAATGGTGTTCTTTGGGATATGAATCGGCCTCTTGAAGAGGATTCGATGTTGCAGATCTTTAAGTTTGATGATGATGAAGGGAGAGATACTTTTTGGCATTCTAGTGCTCATATTCTTGGACAGTCTCTTGAGACAGAGTATGGATGCAAGCTTTGCATTGGGCCTTGCACCACCAGAGGAGAGGGATTCTATTATGACGCGTTTTATGGTGACTTGGGTCTGAATGATGATCACTTTCAACAAATTGTAGCTGAAGCATTGAAGGCTGTTGCGCAAAAACAACCCTTTGAGCGCATTGAAGTGACACGCGATCAGGCGCTTGAGATATTTTCTGATAATAAGTTTAAGGTCGAAATTATCAATGATTTGCCCGCTGACAAGACTATAACAGTGTACAGATGTGGACCCCTCGTTGATTTGTGTCGAGGACCACATATTCCTAATACTTCCTTTGTCAAAGCAATTGCATGTTTGAAGGCCTCGTCAGCATATTGGAGGGGAGACAAAGATAGAGAAAGTTTACAAAGAGTTTATGGCATATCTTATCCTGATAATAAGCGTTTAAAGGAATATTTGCATCGGCTTGAAGAGGCTAAAAAGTATGATCATAGGATTTTGGGAGTGAAACAGGAGCTTATTTATCATCATGAGTGGAGTCCGGGAAGCTGGTTTTTTCTTCCACATGGTGCTCGGATCTACAACAAACTAATGAACTTCATTCGAGATCAGTACAGAGACAGGGGCTATCAAGAGGTTATATCACCGAATGTCTTCAACATGGACCTGTGGGTGCAATCTGGTCATGCGGCAAATTATAAAGAGGATATGTTTGTCTTAGAGATTGACAAACAAGAGTTTGGATTGAAACCAATGAATTGCCCTGGGCACTGCTTGATGTATAAACACAGGGTTCGATCATATAGAGAGCTTCCTCTCCGTTTTGCTGATTTTGGGGTTTTGCATCGAAATGAGGCTAGTGGTGCCCTGAGTGGATTAACACGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTCTGCCGGGAGTCCCAGATAAAAGATGAAGTCAGAAATGCCTTGAACTTCATCGATTATGTCTATCAAATATTTGGTTTCTCATATGAACTGAAACTTTCAACGAGACCAGAGAGATACCTTGGAAATATTGAAACATGGGAGAAGGCTGAAAATTCTCTCAAGGAAGCTTTGGATGAGTTTGGCAAGCCATGGCAGTTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATAGACATCAGTGTATCTGATGCATTGAGCAGGAAATTCCAGTGTGCAACTCTACAGCTTGACTTCCAGCTTCCTGATCGTTTCAAGTTGGAGTTCTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGTTATGATACATAGAGCTATTCTAGGATCTGTTGAACGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCCTTCTGGCTCAGTCCTCGTCAAGCAATTCTGTGCCCCGTCTCTGAGAAATCACAAGCTTATGCACTGCAGGTACGAGATCAGATCCACCAAGCAGGGTATCACGTAGATGCTGATACAACTGACAGGAAGATTCAGAAGAAGGTACGAGAAGCTCAGTTAGCACAATACAACTACATCTTGGTTGTTGGAGAAGAGGAAGCTAAGACAGGACAGGTGAGTGTACGCGTCAGGGATAAGGCAGACCATAGCGTTATGACTATTGAGAACCTGCTCCAACACTTCAAAGACGAAGTTGAAGCTTTCCACTGA 2148 0.4385 MLCSLIRLRRNTFSSSSTSLLLHLTNRFSSTTSSSSFSAAMVAHAKDETYLATTIPKRIQLFESIQAEQQTRRLSLSPDPIKVTLPDGNVKEGKKWQTTPFDVALEISKNLANNALIAKVNGVLWDMNRPLEEDSMLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFQQIVAEALKAVAQKQPFERIEVTRDQALEIFSDNKFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGDKDRESLQRVYGISYPDNKRLKEYLHRLEEAKKYDHRILGVKQELIYHHEWSPGSWFFLPHGARIYNKLMNFIRDQYRDRGYQEVISPNVFNMDLWVQSGHAANYKEDMFVLEIDKQEFGLKPMNCPGHCLMYKHRVRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRNALNFIDYVYQIFGFSYELKLSTRPERYLGNIETWEKAENSLKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEFSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQAYALQVRDQIHQAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRVRDKADHSVMTIENLLQHFKDEVEAFH* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1674 715 TIGRFAM thrS: threonine--tRNA ligase 152 710 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 SMART tRNA_SAD_4 249 298 IPR012947 GO:0004812|GO:0005524|GO:0043039
Mal6g1674 715 Hamap Threonine--tRNA ligase [thrS]. 146 713 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 44 714 - -
Mal6g1674 715 Gene3D - 79 140 IPR012675 -
Mal6g1674 715 ProSiteProfiles TGS domain profile. 79 141 IPR004095 -
Mal6g1674 715 CDD ThrRS_anticodon 618 708 - -
Mal6g1674 715 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 249 298 IPR012947 GO:0004812|GO:0005524|GO:0043039
Mal6g1674 715 Gene3D - 612 715 IPR036621 -
Mal6g1674 715 CDD ThrRS_core 322 618 IPR033728 -
Mal6g1674 715 Pfam TGS domain 81 141 IPR004095 -
Mal6g1674 715 PANTHER THREONINE-TRNA LIGASE 44 714 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 SUPERFAMILY Class II aaRS ABD-related 606 712 - -
Mal6g1674 715 SUPERFAMILY ThrRS/AlaRS common domain 143 320 IPR018163 GO:0000166
Mal6g1674 715 SUPERFAMILY TGS-like 81 141 IPR012676 -
Mal6g1674 715 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 401 608 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mal6g1674 715 Gene3D Bira Bifunctional Protein; Domain 2 304 611 IPR045864 -
Mal6g1674 715 Pfam Anticodon binding domain 620 709 IPR004154 -
Mal6g1674 715 SUPERFAMILY Class II aaRS and biotin synthetases 322 605 IPR045864 -
Mal6g1674 715 CDD TGS_ThrRS 81 146 - -
Mal6g1674 715 Gene3D - 144 302 - -
Mal6g1674 715 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 347 613 IPR006195 -
Mal6g1674 715 PRINTS Threonyl-tRNA synthetase signature 586 599 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 PRINTS Threonyl-tRNA synthetase signature 542 570 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 PRINTS Threonyl-tRNA synthetase signature 408 436 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 PRINTS Threonyl-tRNA synthetase signature 441 464 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Mal6g1674 715 PRINTS Threonyl-tRNA synthetase signature 613 625 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1674 Mal-Chr6 31370989 31383628 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1674 K01868 - gmx:100812652 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1674 6 31370989 31383628 Mal6g1674 6 31370989 31383628 ECH